Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 AC116050.2-201ENST00000612102 1779 ntBASIC20.73■□□□□ 0.91
CAPN8A6NHC0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 AC007322.3-201ENST00000426526 701 ntBASIC20.73■□□□□ 0.91
CAPN8A6NHC0 TSPY20P-201ENST00000450910 630 ntBASIC20.73■□□□□ 0.91
CAPN8A6NHC0 AL050303.2-201ENST00000619798 666 ntBASIC20.73■□□□□ 0.91
CAPN8A6NHC0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN8A6NHC0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 AC016405.3-201ENST00000607710 860 ntBASIC20.72■□□□□ 0.91
CAPN8A6NHC0 FAM21FP-204ENST00000608637 956 ntBASIC20.72■□□□□ 0.91
CAPN8A6NHC0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN8A6NHC0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 GPX1P1-201ENST00000388829 606 ntBASIC20.71■□□□□ 0.91
CAPN8A6NHC0 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.71■□□□□ 0.91
CAPN8A6NHC0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN8A6NHC0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.91
CAPN8A6NHC0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 AC069236.1-201ENST00000604339 616 ntBASIC20.7■□□□□ 0.9
CAPN8A6NHC0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN8A6NHC0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 AC011484.1-201ENST00000377652 1995 ntBASIC20.69■□□□□ 0.9
CAPN8A6NHC0 AC093827.2-201ENST00000512654 315 ntBASIC20.69■□□□□ 0.9
CAPN8A6NHC0 RARRES2P4-201ENST00000514074 484 ntBASIC20.69■□□□□ 0.9
CAPN8A6NHC0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.69■□□□□ 0.9
CAPN8A6NHC0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms