Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 ABHD17AP3-201ENST00000503096 1137 ntBASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.3■□□□□ 0.04
SMIM27A0A1W2PRY6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM27A0A1W2PRY6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 AC021242.3-201ENST00000607598 1377 ntBASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 OR2I1P-207ENST00000453522 948 ntBASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 AC010980.1-201ENST00000587192 1142 ntBASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.28■□□□□ 0.04
SMIM27A0A1W2PRY6 BX005040.4-201ENST00000637145 1518 ntBASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 pRNA.6-201ENST00000610482 90 ntBASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 pRNA.5-201ENST00000612139 90 ntBASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 pRNA.11-201ENST00000618423 90 ntBASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 pRNA.13-201ENST00000619112 90 ntBASIC15.27■□□□□ 0.04
SMIM27A0A1W2PRY6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 TMEM179-206ENST00000616017 1645 ntBASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 Z82202.1-201ENST00000623446 1880 ntBASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM27A0A1W2PRY6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms