Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
A0A1W2PRF3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.81■□□□□ 0.28
A0A1W2PRF3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
A0A1W2PRF3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
A0A1W2PRF3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
A0A1W2PRF3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.8■□□□□ 0.28
A0A1W2PRF3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
A0A1W2PRF3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.8■□□□□ 0.28
A0A1W2PRF3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
A0A1W2PRF3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
A0A1W2PRF3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
A0A1W2PRF3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.8■□□□□ 0.28
A0A1W2PRF3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
A0A1W2PRF3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
A0A1W2PRF3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.8■□□□□ 0.28
A0A1W2PRF3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
A0A1W2PRF3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
A0A1W2PRF3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
A0A1W2PRF3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
A0A1W2PRF3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
A0A1W2PRF3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.79■□□□□ 0.28
A0A1W2PRF3 AC116050.2-201ENST00000612102 1779 ntBASIC16.79■□□□□ 0.28
A0A1W2PRF3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
A0A1W2PRF3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
A0A1W2PRF3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
A0A1W2PRF3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.79■□□□□ 0.28
A0A1W2PRF3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
A0A1W2PRF3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.79■□□□□ 0.28
A0A1W2PRF3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
A0A1W2PRF3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
A0A1W2PRF3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
A0A1W2PRF3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
A0A1W2PRF3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
A0A1W2PRF3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.79■□□□□ 0.28
A0A1W2PRF3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.79■□□□□ 0.28
A0A1W2PRF3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.79■□□□□ 0.28
A0A1W2PRF3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
A0A1W2PRF3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
A0A1W2PRF3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
A0A1W2PRF3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
A0A1W2PRF3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
A0A1W2PRF3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
A0A1W2PRF3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
A0A1W2PRF3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
A0A1W2PRF3 FEM1AP4-201ENST00000443167 1987 ntBASIC16.78■□□□□ 0.28
A0A1W2PRF3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
A0A1W2PRF3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
A0A1W2PRF3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
A0A1W2PRF3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.78■□□□□ 0.28
A0A1W2PRF3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
A0A1W2PRF3 AC026310.3-201ENST00000625186 2373 ntBASIC16.78■□□□□ 0.28
A0A1W2PRF3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.78■□□□□ 0.28
A0A1W2PRF3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
A0A1W2PRF3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
A0A1W2PRF3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
A0A1W2PRF3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
A0A1W2PRF3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.78■□□□□ 0.28
A0A1W2PRF3 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.78■□□□□ 0.28
A0A1W2PRF3 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.78■□□□□ 0.28
A0A1W2PRF3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
A0A1W2PRF3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.78■□□□□ 0.28
A0A1W2PRF3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.78■□□□□ 0.28
A0A1W2PRF3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
A0A1W2PRF3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
A0A1W2PRF3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
A0A1W2PRF3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
A0A1W2PRF3 AC007375.3-201ENST00000600936 2314 ntBASIC16.78■□□□□ 0.28
A0A1W2PRF3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
A0A1W2PRF3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
A0A1W2PRF3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
A0A1W2PRF3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
A0A1W2PRF3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
A0A1W2PRF3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
A0A1W2PRF3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
A0A1W2PRF3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
A0A1W2PRF3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.77■□□□□ 0.28
A0A1W2PRF3 LSM12P1-201ENST00000411836 588 ntBASIC16.77■□□□□ 0.28
A0A1W2PRF3 AL512625.2-201ENST00000417533 625 ntBASIC16.77■□□□□ 0.28
A0A1W2PRF3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
A0A1W2PRF3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.77■□□□□ 0.28
A0A1W2PRF3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.77■□□□□ 0.28
A0A1W2PRF3 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.77■□□□□ 0.28
A0A1W2PRF3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.77■□□□□ 0.28
A0A1W2PRF3 AL162412.1-201ENST00000567129 965 ntBASIC16.77■□□□□ 0.28
A0A1W2PRF3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.77■□□□□ 0.28
A0A1W2PRF3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
A0A1W2PRF3 FAM21FP-204ENST00000608637 956 ntBASIC16.77■□□□□ 0.28
A0A1W2PRF3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
A0A1W2PRF3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.77■□□□□ 0.28
A0A1W2PRF3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
A0A1W2PRF3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.77■□□□□ 0.27
A0A1W2PRF3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
A0A1W2PRF3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
A0A1W2PRF3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
A0A1W2PRF3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
A0A1W2PRF3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
A0A1W2PRF3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
A0A1W2PRF3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
A0A1W2PRF3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
A0A1W2PRF3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms