Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	SHQ1	YIL104C	1524 nt		3.84	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	YNR065C	YNR065C	3351 nt		3.83	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	NCR1	YPL006W	3513 nt		3.83	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	YER039C-A	YER039C-A	219 nt		3.83	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	TMA22	YJR014W	597 nt		3.83	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	RPL36B	YPL249C-A	303 nt		3.83	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	NAN1	YPL126W	2691 nt		3.83	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	SEC15	YGL233W	2733 nt		3.82	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	YDL011C	YDL011C	324 nt		3.82	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	MZM1	YDR493W	372 nt		3.82	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	YHL042W	YHL042W	453 nt		3.82	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	HHF1	YBR009C	312 nt		3.82	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	KIN2	YLR096W	3444 nt		3.82	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	VPS41	YDR080W	2979 nt		3.82	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	tT(UGU)Q1	tT(UGU)Q1	76 nt		3.81	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	YIL032C	YIL032C	357 nt		3.81	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	YIL102C	YIL102C	306 nt		3.81	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	PFK26	YIL107C	2484 nt		3.81	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	ECM16	YMR128W	3804 nt		3.81	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	ALA1	YOR335C	2877 nt		3.8	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	YEL014C	YEL014C	306 nt		3.8	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	HTB2	YBL002W	396 nt		3.8	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	ARO1	YDR127W	4767 nt		3.8	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	YAK1	YJL141C	2424 nt		3.8	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	MTR4	YJL050W	3222 nt		3.8	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	VBA4	YDR119W	2307 nt		3.79	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	COG8	YML071C	1824 nt		3.79	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	REV1	YOR346W	2958 nt		3.79	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	KIN4	YOR233W	2403 nt		3.79	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	TCB3	YML072C	4638 nt		3.79	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	CHS3	YBR023C	3498 nt		3.79	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	IOC3	YFR013W	2364 nt		3.79	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	GPG1	YGL121C	381 nt		3.79	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	RPS28B	YLR264W	204 nt		3.79	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	YBL083C	YBL083C	426 nt		3.79	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	FRE8	YLR047C	2061 nt		3.79	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	SMC2	YFR031C	3513 nt		3.78	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	ENA5	YDR038C	3276 nt		3.78	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	ENA2	YDR039C	3276 nt		3.78	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	ENA1	YDR040C	3276 nt		3.78	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	RPS24A	YER074W	408 nt		3.78	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	HEM4	YOR278W	828 nt		3.78	□□□□□ -1.8
TY4B-P	A0A0B7P3V8	YDR230W	YDR230W	348 nt		3.77	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	TIM8	YJR135W-A	264 nt		3.77	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	YKR033C	YKR033C	426 nt		3.77	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	YLR140W	YLR140W	327 nt		3.77	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	SLP1	YOR154W	1764 nt		3.76	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	RIM20	YOR275C	1986 nt		3.76	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	AYR1	YIL124W	894 nt		3.76	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	YML116W-A	YML116W-A	303 nt		3.76	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	JJJ2	YJL162C	1752 nt		3.76	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	BFA1	YJR053W	1725 nt		3.75	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	CCT7	YJL111W	1653 nt		3.75	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	TPS2	YDR074W	2691 nt		3.75	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	PAU2	YEL049W	363 nt		3.75	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	REG1	YDR028C	3045 nt		3.75	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	YBR225W	YBR225W	2703 nt		3.74	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	CWH43	YCR017C	2862 nt		3.74	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	COF1	YLL050C	432 nt		3.74	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	YLR154C-H	YLR154C-H	132 nt		3.74	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	YLR156C-A	YLR156C-A	132 nt		3.74	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	YLR157C-C	YLR157C-C	132 nt		3.74	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	YLR159C-A	YLR159C-A	132 nt		3.74	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	SHH3	YMR118C	591 nt		3.74	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	RPL23A	YBL087C	414 nt		3.74	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	ATP15	YPL271W	189 nt		3.74	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	YPR053C	YPR053C	456 nt		3.74	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	SWD3	YBR175W	948 nt		3.74	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	PDS5	YMR076C	3834 nt		3.73	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	GLC3	YEL011W	2115 nt		3.73	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	SMT3	YDR510W	306 nt		3.73	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	YMR172C-A	YMR172C-A	384 nt		3.73	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	ISU1	YPL135W	498 nt		3.73	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	LOS1	YKL205W	3303 nt		3.73	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	MPS1	YDL028C	2295 nt		3.73	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	BMS1	YPL217C	3552 nt		3.73	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	AIM9	YER080W	1884 nt		3.73	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	ECM25	YJL201W	1800 nt		3.72	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	TCP1	YDR212W	1680 nt		3.72	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	CIN1	YOR349W	3045 nt		3.72	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	TMA17	YDL110C	453 nt		3.72	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	MDV1	YJL112W	2145 nt		3.72	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	YKL156C-A	YKL156C-A	117 nt		3.72	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	RFC3	YNL290W	1023 nt		3.72	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	SOK2	YMR016C	2358 nt		3.71	□□□□□ -1.81
TY4B-P	A0A0B7P3V8	TFC1	YBR123C	1950 nt		3.71	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	CWC22	YGR278W	1734 nt		3.71	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	TSA2	YDR453C	591 nt		3.71	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	YGR051C	YGR051C	324 nt		3.71	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	YJL020W-A	YJL020W-A	258 nt		3.71	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	RPL32	YBL092W	393 nt		3.71	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	BCH1	YMR237W	2175 nt		3.7	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	YER189W	YER189W	369 nt		3.7	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	YAL064W-B	YAL064W-B	381 nt		3.7	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	YNL010W	YNL010W	726 nt		3.7	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	MAK21	YDR060W	3078 nt		3.7	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	SMC3	YJL074C	3693 nt		3.69	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	SSY1	YDR160W	2559 nt		3.69	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	FAA2	YER015W	2235 nt		3.69	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	USE1	YGL098W	738 nt		3.69	□□□□□ -1.82

Retrieved 100 of 7,029 protein–RNA pairs in 114 ms