Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV21A0A0B4J279 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV21A0A0B4J279 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
TRAV21A0A0B4J279 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV21A0A0B4J279 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV21A0A0B4J279 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV21A0A0B4J279 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TRAV21A0A0B4J279 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 AL354811.1-201ENST00000610286 706 ntBASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV21A0A0B4J279 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 AC120498.10-201ENST00000621827 505 ntBASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV21A0A0B4J279 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 MIR939-201ENST00000401314 82 ntBASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 AF213884.3-201ENST00000563833 479 ntBASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 AC092720.2-201ENST00000602388 1665 ntBASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV21A0A0B4J279 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 AL391422.3-201ENST00000603791 2761 ntBASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 AL162377.1-201ENST00000618844 1793 ntBASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms