Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 AC120498.8-201ENST00000614275 531 ntBASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV17A0A0B4J275 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV17A0A0B4J275 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV17A0A0B4J275 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV17A0A0B4J275 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV17A0A0B4J275 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV17A0A0B4J275 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV17A0A0B4J275 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV17A0A0B4J275 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV17A0A0B4J275 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.58■□□□□ 0.56
TRAV17A0A0B4J275 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV17A0A0B4J275 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV17A0A0B4J275 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV17A0A0B4J275 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 MIR4497-201ENST00000583208 89 ntBASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 MTDHP1-201ENST00000605323 784 ntBASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRAV17A0A0B4J275 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 AC006557.6-201ENST00000623071 864 ntBASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV17A0A0B4J275 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms