Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 AL136967.2-201ENST00000623968 743 ntBASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 AC026471.6-201ENST00000622954 1905 ntBASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-4A0A0B4J246 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 LETM1P2-201ENST00000597330 2178 ntBASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-4A0A0B4J246 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 AL354811.1-201ENST00000610286 706 ntBASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV8-4A0A0B4J246 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms