Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-2A0A0B4J235 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-2A0A0B4J235 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-2A0A0B4J235 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV13-2A0A0B4J235 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-2A0A0B4J235 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV13-2A0A0B4J235 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-2A0A0B4J235 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-2A0A0B4J235 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-2A0A0B4J235 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-2A0A0B4J235 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-2A0A0B4J235 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 MIR7108-201ENST00000614319 87 ntBASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 AC129492.7-201ENST00000622992 756 ntBASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
TRAV13-2A0A0B4J235 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 FP700111.2-201ENST00000619190 1892 ntBASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 AP004607.7-201ENST00000527152 1677 ntBASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-2A0A0B4J235 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 IDNK-201ENST00000376417 511 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 AC004408.2-201ENST00000623613 2777 ntBASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 AC009102.2-201ENST00000606772 1639 ntBASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 VGF-203ENST00000611537 1622 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV13-2A0A0B4J235 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 TCF3P1-201ENST00000423021 1937 ntBASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms