Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 U1.40-201ENST00000610976 164 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 U1.27-201ENST00000615842 164 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 CCL4L2-213ENST00000617405 846 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SLC1A1P43005 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC9.35□□□□□ -0.91
SLC1A1P43005 LINC01835-203ENST00000639800 567 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 HERC2P8-202ENST00000564334 3705 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC9.35□□□□□ -0.91
SLC1A1P43005 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SLC1A1P43005 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC9.35□□□□□ -0.91
SLC1A1P43005 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC9.35□□□□□ -0.91
SLC1A1P43005 SBNO1-203ENST00000602398 4313 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
SLC1A1P43005 AC115619.1-201ENST00000567376 1605 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
SLC1A1P43005 CASP5-202ENST00000393141 1488 ntTSL 5 BASIC9.34□□□□□ -0.91
SLC1A1P43005 CAST-244ENST00000515663 1473 ntTSL 2 BASIC9.34□□□□□ -0.91
SLC1A1P43005 LINC01847-203ENST00000641163 1490 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 EYA1-207ENST00000419131 1723 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 ZNF234-204ENST00000592437 2292 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC9.34□□□□□ -0.91
SLC1A1P43005 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SLC1A1P43005 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 CALD1-201ENST00000361675 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 CLEC5A-207ENST00000551012 1420 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 MYLK-220ENST00000578202 1447 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 BMP15-201ENST00000252677 1179 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
SLC1A1P43005 PRR32-201ENST00000371125 1228 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SLC1A1P43005 DYNLL1-202ENST00000392508 697 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 OR2L6P-201ENST00000416377 940 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 AC009501.2-201ENST00000428700 312 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 AL353072.1-201ENST00000446021 442 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 LINC01280-201ENST00000449783 1184 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 AC098613.1-201ENST00000451485 656 ntTSL 3 BASIC9.34□□□□□ -0.91
SLC1A1P43005 VDAC1P12-201ENST00000451853 882 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 AC017104.1-203ENST00000454416 466 ntTSL 3 BASIC9.34□□□□□ -0.91
SLC1A1P43005 WWTR1-IT1-201ENST00000463167 451 ntTSL 5 BASIC9.34□□□□□ -0.91
SLC1A1P43005 APOA2-203ENST00000463812 401 ntTSL 2 BASIC9.34□□□□□ -0.91
SLC1A1P43005 GNGT2-203ENST00000507680 585 ntAPPRIS P1 TSL 4 BASIC9.34□□□□□ -0.91
SLC1A1P43005 KRTAP9-12P-201ENST00000514388 532 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 GNGT2-206ENST00000515635 783 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 IGLV3-29-201ENST00000520084 244 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 AC010319.1-201ENST00000526892 1258 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 LINC00958-203ENST00000527945 1121 ntTSL 2 BASIC9.34□□□□□ -0.91
SLC1A1P43005 AC004801.5-201ENST00000552958 550 ntTSL 4 BASIC9.34□□□□□ -0.91
SLC1A1P43005 ASB9P1-201ENST00000557146 793 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 HNRNPCP3-201ENST00000560385 875 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 CAPN3-219ENST00000569136 1029 ntTSL 2 BASIC9.34□□□□□ -0.91
SLC1A1P43005 AC018697.1-202ENST00000582650 592 ntTSL 4 BASIC9.34□□□□□ -0.91
SLC1A1P43005 ZNF559-203ENST00000585352 967 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 AL627309.8-201ENST00000595919 284 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 LINC00649-209ENST00000597626 612 ntTSL 5 BASIC9.34□□□□□ -0.91
SLC1A1P43005 AL513479.1-201ENST00000611376 585 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 RN7SL536P-201ENST00000612366 290 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 AC004466.3-201ENST00000615576 546 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 CDK2AP2P1-201ENST00000617479 328 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 RN7SL545P-201ENST00000620547 290 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 RN7SL759P-201ENST00000620768 290 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 LINC02028-221ENST00000622169 621 ntTSL 5 BASIC9.34□□□□□ -0.91
SLC1A1P43005 TEX51-209ENST00000636457 811 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
SLC1A1P43005 AC037487.1-201ENST00000583416 2474 ntTSL 5 BASIC9.34□□□□□ -0.91
SLC1A1P43005 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
SLC1A1P43005 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC9.34□□□□□ -0.91
SLC1A1P43005 NRG3-204ENST00000404576 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC9.34□□□□□ -0.91
SLC1A1P43005 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC9.34□□□□□ -0.91
SLC1A1P43005 SERPINB9-201ENST00000380698 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 AC104619.3-201ENST00000509116 1387 ntBASIC9.34□□□□□ -0.91
SLC1A1P43005 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC9.34□□□□□ -0.91
SLC1A1P43005 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC9.34□□□□□ -0.91
SLC1A1P43005 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SLC1A1P43005 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 APOL1-203ENST00000397279 1564 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
SLC1A1P43005 KIAA1328-203ENST00000586501 1577 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC9.33□□□□□ -0.92
SLC1A1P43005 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC9.33□□□□□ -0.92
SLC1A1P43005 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC9.33□□□□□ -0.92
SLC1A1P43005 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC9.33□□□□□ -0.92
SLC1A1P43005 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
SLC1A1P43005 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
SLC1A1P43005 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 SCIMP-201ENST00000399600 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 HCG18-234ENST00000413358 916 ntTSL 3 BASIC9.33□□□□□ -0.92
SLC1A1P43005 RPL4P5-201ENST00000413888 1276 ntBASIC9.33□□□□□ -0.92
SLC1A1P43005 RPS5P2-201ENST00000415238 640 ntBASIC9.33□□□□□ -0.92
SLC1A1P43005 AC009226.1-203ENST00000418850 741 ntTSL 5 BASIC9.33□□□□□ -0.92
SLC1A1P43005 VN2R9P-201ENST00000431428 953 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms