Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC012506.2-201ENST00000426527 533 ntTSL 4 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 OR2W6P-201ENST00000439689 939 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 RN7SL231P-201ENST00000461840 272 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 IL12A-AS1-201ENST00000462431 988 ntTSL 5 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 FGF12-AS1-202ENST00000530635 555 ntTSL 4 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC068733.1-201ENST00000532430 1288 ntTSL 2 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC020611.1-201ENST00000537101 254 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 AL929601.1-202ENST00000551067 418 ntTSL 3 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC084033.3-201ENST00000551421 451 ntTSL 2 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC106028.1-201ENST00000554322 526 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 IGHV3OR16-15-201ENST00000565463 414 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 FRG2KP-202ENST00000568403 827 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC005580.1-202ENST00000587140 562 ntTSL 5 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC011442.1-201ENST00000587831 366 ntTSL 5 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC018638.6-201ENST00000605007 1267 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC020907.4-201ENST00000605640 526 ntTSL 3 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC012594.1-253ENST00000609532 846 ntTSL 5 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 ST7-OT3_2.1-201ENST00000617884 137 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC001226.1-201ENST00000620512 539 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC012594.1-214ENST00000630496 858 ntTSL 5 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 ANO4-207ENST00000550015 2293 ntTSL 2 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 TCF4-226ENST00000565018 2357 ntTSL 5 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 PDZPH1P-201ENST00000412514 1783 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 CCDC190-203ENST00000367912 2605 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNX18Q96RF0 GAPVD1-219ENST00000495955 5309 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNX18Q96RF0 RSPH10B2-202ENST00000403107 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNX18Q96RF0 RSPH10B-203ENST00000405415 3222 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNX18Q96RF0 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AKAP10-202ENST00000395536 1815 ntTSL 5 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 RN7SKP79-201ENST00000363373 336 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 RPS27-202ENST00000392558 625 ntTSL 2 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 HIST1H1PS1-201ENST00000404269 574 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 RFFL-203ENST00000413582 1217 ntTSL 5 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AL592486.1-201ENST00000418343 1220 ntTSL 2 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 LINC01715-202ENST00000427804 688 ntTSL 5 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AC245517.3-201ENST00000440562 250 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 AL583808.1-201ENST00000445976 499 ntTSL 3 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AC009229.1-201ENST00000450854 622 ntTSL 4 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 PGGT1BP1-201ENST00000455321 1023 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 AP001464.1-201ENST00000457565 323 ntTSL 5 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AF111169.1-201ENST00000469811 374 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 RN7SL735P-201ENST00000471015 292 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 HSD17B7P2-201ENST00000471365 1033 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AC010768.2-201ENST00000532524 567 ntTSL 4 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AC124248.1-201ENST00000558221 402 ntTSL 5 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AC104041.1-201ENST00000560054 569 ntTSL 5 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 HCCAT5-201ENST00000569990 1079 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AC009831.3-201ENST00000582538 586 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 MIR2467-201ENST00000584559 81 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 AC048344.3-201ENST00000605512 251 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 AP000769.1-201ENST00000619960 844 ntTSL 2 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 SERPINB11-208ENST00000623262 918 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNX18Q96RF0 LINC00969-266ENST00000626156 683 ntTSL 5 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AC078776.2-201ENST00000641021 285 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 ATP5A1P3-201ENST00000573189 1507 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 CPEB1-AS1-202ENST00000618020 2994 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 ZNF587P1-201ENST00000415378 1386 ntBASIC8.32□□□□□ -1.08
SNX18Q96RF0 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNX18Q96RF0 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
SNX18Q96RF0 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNX18Q96RF0 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNX18Q96RF0 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNX18Q96RF0 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 ZBTB37-202ENST00000367702 1337 ntTSL 5 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 ZNF410-219ENST00000556797 1311 ntTSL 2 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 JAKMIP2-AS1-201ENST00000626945 1920 ntTSL 2 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 AC010643.1-201ENST00000599433 3263 ntTSL 2 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 LINC01519-201ENST00000454178 2029 ntTSL 5 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 ACTBP13-201ENST00000423971 3959 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 CTAGE12P-201ENST00000400348 2364 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 HIST1H2BI-201ENST00000377733 381 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 IGHV1-46-201ENST00000390622 655 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 PPM1N-202ENST00000396736 527 ntTSL 5 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 AL513123.1-201ENST00000415883 597 ntTSL 5 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 LINC02068-202ENST00000424941 563 ntTSL 2 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms