Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 DCLRE1C-205ENST00000378249 2246 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 OR4C15-201ENST00000314644 1113 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 INIP-201ENST00000374234 713 ntTSL 2 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 ZDHHC4P1-201ENST00000396712 1035 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 SNHG26-202ENST00000422542 1106 ntTSL 3 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC136896.1-201ENST00000438334 547 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AL109933.1-201ENST00000448126 292 ntTSL 5 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 GAPDHP45-201ENST00000452090 349 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 TDGF1P3-201ENST00000493351 567 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 RN7SL700P-201ENST00000496982 294 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 NBPF22P-201ENST00000508988 1143 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 RBM48P1-201ENST00000509661 1102 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AL645949.1-201ENST00000510094 324 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC025423.3-201ENST00000541551 469 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 RBM7-208ENST00000545678 867 ntTSL 3 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 ILF2P2-201ENST00000547482 1117 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC034102.4-201ENST00000548595 434 ntTSL 5 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC128707.1-202ENST00000548963 693 ntTSL 5 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC044798.2-201ENST00000564222 1235 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 FRG2GP-201ENST00000567870 615 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 ZNF213-AS1-208ENST00000575139 530 ntTSL 4 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 SSH2-209ENST00000579954 428 ntTSL 3 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC004147.5-201ENST00000581727 536 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 MIR4440-201ENST00000583986 98 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC008474.1-201ENST00000589127 573 ntTSL 4 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AL035422.2-201ENST00000603059 565 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 BNIP3P37-201ENST00000604107 901 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC008875.1-201ENST00000607715 811 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC083862.2-201ENST00000608819 1145 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC005086.2-201ENST00000624939 228 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 EXOC1L-202ENST00000636125 863 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC078776.2-201ENST00000641021 285 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 CKMT2-AS1-202ENST00000501927 2463 ntTSL 2 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 OTUB2-201ENST00000203664 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 JAKMIP2-AS1-201ENST00000626945 1920 ntTSL 2 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 C2orf42-201ENST00000264434 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 GDNF-AS1-205ENST00000637926 3819 ntTSL 5 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AC025031.5-201ENST00000623851 2523 ntBASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AL445309.1-201ENST00000607565 1989 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 LINC01411-203ENST00000507361 2098 ntTSL 3 BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 ZNF157-201ENST00000377073 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 CHRM2-202ENST00000401861 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 TMPRSS4-220ENST00000618855 3531 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 LINC01012-204ENST00000629732 2771 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 AC211476.4-201ENST00000275546 699 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 MSR1-203ENST00000355282 1167 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 AC009967.1-201ENST00000379462 793 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 SNORA48.6-201ENST00000391156 130 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 PMS2P5-201ENST00000398065 516 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 VPS53-203ENST00000401468 1269 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 UST-AS1-201ENST00000413845 714 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 AL389885.1-201ENST00000447227 384 ntTSL 3 BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 AC073465.3-201ENST00000448468 405 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 RN7SL337P-201ENST00000462468 301 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 RN7SL845P-201ENST00000484385 290 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 ENO1P3-201ENST00000484903 1224 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 RN7SL78P-201ENST00000495193 281 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 RPL36P16-201ENST00000496996 306 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 ADAM20P3-201ENST00000508710 2106 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 RAET1E-205ENST00000529948 875 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 AP000866.3-201ENST00000534607 433 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 OR4K16P-201ENST00000554603 969 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 AC004828.1-201ENST00000555303 654 ntTSL 3 BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 AC034105.5-201ENST00000564017 314 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 AC118754.2-201ENST00000574133 537 ntTSL 4 BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 E2F3P1-201ENST00000589887 1230 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 AP002856.2-202ENST00000606885 755 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 HACL1-208ENST00000456194 1880 ntTSL 2 BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 CU634019.3-201ENST00000623962 2456 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 FP236315.2-201ENST00000624506 2456 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 FP671120.2-201ENST00000624806 2456 ntBASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 SLC8A1-202ENST00000402441 3065 ntTSL 2 BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 PCLO-209ENST00000618073 1614 ntTSL 5 BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms