Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 KRT18P11-201ENST00000435214 1283 ntBASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 UBE2DNL-204ENST00000602536 740 ntBASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 RARRES2P11-201ENST00000635158 484 ntBASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 MYCNOS-205ENST00000641950 531 ntBASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 AL157384.1-201ENST00000445995 2473 ntBASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DRB4X5D2U9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 AC137761.2-201ENST00000561729 223 ntBASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 AC145350.3-201ENST00000569033 163 ntBASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 AC243732.1-201ENST00000612648 864 ntBASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRB4X5D2U9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 AL162430.1-201ENST00000480705 870 ntBASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms