Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 MST1L-201ENST00000442552 2185 ntBASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 OR6D1P-202ENST00000641007 5290 ntBASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC10.69□□□□□ -0.7
LINC01558Q9Y6Z2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 AL512408.1-201ENST00000569378 2000 ntBASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 AC125437.2-201ENST00000625180 2167 ntBASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 AL391005.1-201ENST00000623953 2435 ntBASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01558Q9Y6Z2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms