Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 AC003102.1-202ENST00000563394 1796 ntBASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PCDHGA3Q9Y5H0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 FAM21FP-204ENST00000608637 956 ntBASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA3Q9Y5H0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 PKD1P6-201ENST00000343738 4769 ntBASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 AC100791.3-201ENST00000617619 330 ntBASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA3Q9Y5H0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 LSM12P1-201ENST00000411836 588 ntBASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 AC098590.1-201ENST00000468126 897 ntBASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA3Q9Y5H0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms