Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 FP700111.2-201ENST00000619190 1892 ntBASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF11Q9Y3C5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RNF11Q9Y3C5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 AC027702.1-201ENST00000563810 1770 ntBASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 AC245052.3-201ENST00000450182 901 ntBASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF11Q9Y3C5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 GABARAPL3-202ENST00000624044 1851 ntBASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 KRT18P61-201ENST00000585825 1298 ntBASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF11Q9Y3C5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF11Q9Y3C5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms