Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.14■□□□□ 0.65
IFT52Q9Y366 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT52Q9Y366 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT52Q9Y366 KRT16P2-201ENST00000414673 1423 ntBASIC19.14■□□□□ 0.65
IFT52Q9Y366 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
IFT52Q9Y366 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.14■□□□□ 0.65
IFT52Q9Y366 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.14■□□□□ 0.65
IFT52Q9Y366 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IFT52Q9Y366 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT52Q9Y366 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
IFT52Q9Y366 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT52Q9Y366 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT52Q9Y366 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT52Q9Y366 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT52Q9Y366 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT52Q9Y366 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.13■□□□□ 0.65
IFT52Q9Y366 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.13■□□□□ 0.65
IFT52Q9Y366 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.13■□□□□ 0.65
IFT52Q9Y366 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IFT52Q9Y366 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT52Q9Y366 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.13■□□□□ 0.65
IFT52Q9Y366 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT52Q9Y366 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.13■□□□□ 0.65
IFT52Q9Y366 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
IFT52Q9Y366 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.13■□□□□ 0.65
IFT52Q9Y366 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
IFT52Q9Y366 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT52Q9Y366 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.13■□□□□ 0.65
IFT52Q9Y366 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.12■□□□□ 0.65
IFT52Q9Y366 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
IFT52Q9Y366 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 AC007225.1-201ENST00000566331 1836 ntBASIC19.12■□□□□ 0.65
IFT52Q9Y366 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
IFT52Q9Y366 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.12■□□□□ 0.65
IFT52Q9Y366 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.12■□□□□ 0.65
IFT52Q9Y366 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.12■□□□□ 0.65
IFT52Q9Y366 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
IFT52Q9Y366 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.12■□□□□ 0.65
IFT52Q9Y366 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.12■□□□□ 0.65
IFT52Q9Y366 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
IFT52Q9Y366 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT52Q9Y366 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT52Q9Y366 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IFT52Q9Y366 GABARAPL3-202ENST00000624044 1851 ntBASIC19.11■□□□□ 0.65
IFT52Q9Y366 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.11■□□□□ 0.65
IFT52Q9Y366 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT52Q9Y366 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
IFT52Q9Y366 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.11■□□□□ 0.65
IFT52Q9Y366 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT52Q9Y366 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
IFT52Q9Y366 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.11■□□□□ 0.65
IFT52Q9Y366 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT52Q9Y366 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IFT52Q9Y366 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.11■□□□□ 0.65
IFT52Q9Y366 AC245052.3-201ENST00000450182 901 ntBASIC19.11■□□□□ 0.65
IFT52Q9Y366 AC010141.2-201ENST00000452426 721 ntBASIC19.11■□□□□ 0.65
IFT52Q9Y366 DUX4L2-201ENST00000561772 1275 ntBASIC19.11■□□□□ 0.65
IFT52Q9Y366 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
IFT52Q9Y366 DUX4L6-201ENST00000626483 1275 ntBASIC19.11■□□□□ 0.65
IFT52Q9Y366 DUX4L1-201ENST00000627662 1275 ntBASIC19.11■□□□□ 0.65
IFT52Q9Y366 DUX4L8-201ENST00000629013 1275 ntBASIC19.11■□□□□ 0.65
IFT52Q9Y366 DUX4L3-201ENST00000630187 1275 ntBASIC19.11■□□□□ 0.65
IFT52Q9Y366 DUX4L7-201ENST00000630678 1275 ntBASIC19.11■□□□□ 0.65
IFT52Q9Y366 DUX4L5-201ENST00000630834 1275 ntBASIC19.11■□□□□ 0.65
IFT52Q9Y366 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT52Q9Y366 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT52Q9Y366 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT52Q9Y366 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT52Q9Y366 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
IFT52Q9Y366 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IFT52Q9Y366 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IFT52Q9Y366 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
IFT52Q9Y366 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.1■□□□□ 0.65
IFT52Q9Y366 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT52Q9Y366 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IFT52Q9Y366 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT52Q9Y366 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IFT52Q9Y366 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.1■□□□□ 0.65
IFT52Q9Y366 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT52Q9Y366 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.1■□□□□ 0.65
IFT52Q9Y366 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT52Q9Y366 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IFT52Q9Y366 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT52Q9Y366 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT52Q9Y366 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT52Q9Y366 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT52Q9Y366 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
IFT52Q9Y366 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms