Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RPPH1-201ENST00000516869 333 ntBASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 C1QBPP2-201ENST00000528754 825 ntBASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP3Q9UKI2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 LINC01023-201ENST00000606054 436 ntBASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDC42EP3Q9UKI2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 CYP2T3P-201ENST00000601990 817 ntBASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 REXO1L12P-201ENST00000622156 912 ntBASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 AC139530.1-201ENST00000575312 1977 ntBASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP3Q9UKI2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC42EP3Q9UKI2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.08■□□□□ 0.33
CDC42EP3Q9UKI2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.08■□□□□ 0.33
CDC42EP3Q9UKI2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.08■□□□□ 0.33
CDC42EP3Q9UKI2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.08■□□□□ 0.33
CDC42EP3Q9UKI2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC42EP3Q9UKI2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CDC42EP3Q9UKI2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 AC008403.3-201ENST00000598924 454 ntBASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 AC100791.3-201ENST00000617619 330 ntBASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CDC42EP3Q9UKI2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 AL589743.5-201ENST00000616611 1050 ntBASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms