Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MBD1Q9UIS9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 AC233263.1-201ENST00000578059 224 ntBASIC20.75■□□□□ 0.91
MBD1Q9UIS9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MBD1Q9UIS9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 KRT18P68-201ENST00000392293 1000 ntBASIC20.74■□□□□ 0.91
MBD1Q9UIS9 C1QBPP2-201ENST00000528754 825 ntBASIC20.74■□□□□ 0.91
MBD1Q9UIS9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD1Q9UIS9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 AC092368.3-202ENST00000574180 1591 ntBASIC20.73■□□□□ 0.91
MBD1Q9UIS9 AF106564.1-201ENST00000607058 2553 ntBASIC20.73■□□□□ 0.91
MBD1Q9UIS9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.73■□□□□ 0.91
MBD1Q9UIS9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.72■□□□□ 0.91
MBD1Q9UIS9 RN7SL471P-201ENST00000580476 299 ntBASIC20.72■□□□□ 0.91
MBD1Q9UIS9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 FAM197Y4-202ENST00000622692 608 ntBASIC20.72■□□□□ 0.91
MBD1Q9UIS9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD1Q9UIS9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.71■□□□□ 0.91
MBD1Q9UIS9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.71■□□□□ 0.91
MBD1Q9UIS9 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.71■□□□□ 0.91
MBD1Q9UIS9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MBD1Q9UIS9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.71■□□□□ 0.91
MBD1Q9UIS9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.71■□□□□ 0.91
MBD1Q9UIS9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.71■□□□□ 0.91
MBD1Q9UIS9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD1Q9UIS9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.71■□□□□ 0.91
MBD1Q9UIS9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MBD1Q9UIS9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD1Q9UIS9 AL024507.2-201ENST00000606070 2574 ntBASIC20.71■□□□□ 0.91
MBD1Q9UIS9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MBD1Q9UIS9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 KRT17P3-201ENST00000420566 1262 ntBASIC20.7■□□□□ 0.9
MBD1Q9UIS9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD1Q9UIS9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
MBD1Q9UIS9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD1Q9UIS9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms