Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.16■□□□□ 0.66
CNIH4Q9P003 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.16■□□□□ 0.66
CNIH4Q9P003 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH4Q9P003 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH4Q9P003 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CNIH4Q9P003 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH4Q9P003 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH4Q9P003 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH4Q9P003 CROCCP5-201ENST00000436658 830 ntBASIC19.16■□□□□ 0.66
CNIH4Q9P003 CNN2P6-201ENST00000439038 900 ntBASIC19.16■□□□□ 0.66
CNIH4Q9P003 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.16■□□□□ 0.66
CNIH4Q9P003 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH4Q9P003 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.16■□□□□ 0.66
CNIH4Q9P003 AC005181.1-201ENST00000604782 1256 ntBASIC19.16■□□□□ 0.66
CNIH4Q9P003 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.16■□□□□ 0.66
CNIH4Q9P003 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH4Q9P003 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH4Q9P003 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.16■□□□□ 0.66
CNIH4Q9P003 RBM17P2-201ENST00000616397 1405 ntBASIC19.16■□□□□ 0.66
CNIH4Q9P003 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CNIH4Q9P003 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.15■□□□□ 0.66
CNIH4Q9P003 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CNIH4Q9P003 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.15■□□□□ 0.66
CNIH4Q9P003 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.15■□□□□ 0.66
CNIH4Q9P003 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.15■□□□□ 0.66
CNIH4Q9P003 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CNIH4Q9P003 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.15■□□□□ 0.66
CNIH4Q9P003 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.15■□□□□ 0.66
CNIH4Q9P003 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.15■□□□□ 0.66
CNIH4Q9P003 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH4Q9P003 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CNIH4Q9P003 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH4Q9P003 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.14■□□□□ 0.65
CNIH4Q9P003 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CNIH4Q9P003 FEM1AP1-201ENST00000431297 1995 ntBASIC19.14■□□□□ 0.65
CNIH4Q9P003 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH4Q9P003 ID1-201ENST00000376105 1233 ntBASIC19.14■□□□□ 0.65
CNIH4Q9P003 MIR663A-201ENST00000385250 93 ntBASIC19.14■□□□□ 0.65
CNIH4Q9P003 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.14■□□□□ 0.65
CNIH4Q9P003 AC245052.3-201ENST00000450182 901 ntBASIC19.14■□□□□ 0.65
CNIH4Q9P003 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH4Q9P003 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH4Q9P003 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.14■□□□□ 0.65
CNIH4Q9P003 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.14■□□□□ 0.65
CNIH4Q9P003 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.14■□□□□ 0.65
CNIH4Q9P003 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH4Q9P003 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.14■□□□□ 0.65
CNIH4Q9P003 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH4Q9P003 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH4Q9P003 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH4Q9P003 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CNIH4Q9P003 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH4Q9P003 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.13■□□□□ 0.65
CNIH4Q9P003 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH4Q9P003 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH4Q9P003 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH4Q9P003 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.13■□□□□ 0.65
CNIH4Q9P003 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.13■□□□□ 0.65
CNIH4Q9P003 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.13■□□□□ 0.65
CNIH4Q9P003 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH4Q9P003 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CNIH4Q9P003 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH4Q9P003 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH4Q9P003 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.12■□□□□ 0.65
CNIH4Q9P003 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.12■□□□□ 0.65
CNIH4Q9P003 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 NCF1B-203ENST00000435988 1254 ntBASIC19.12■□□□□ 0.65
CNIH4Q9P003 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.12■□□□□ 0.65
CNIH4Q9P003 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CNIH4Q9P003 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.12■□□□□ 0.65
CNIH4Q9P003 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.12■□□□□ 0.65
CNIH4Q9P003 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNIH4Q9P003 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNIH4Q9P003 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CNIH4Q9P003 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms