Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD8Q9HCK8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 HTR7P1-201ENST00000538670 1336 ntBASIC19.35■□□□□ 0.69
CHD8Q9HCK8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 FAM87A-204ENST00000613235 858 ntBASIC19.35■□□□□ 0.69
CHD8Q9HCK8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD8Q9HCK8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD8Q9HCK8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD8Q9HCK8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD8Q9HCK8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD8Q9HCK8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CHD8Q9HCK8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD8Q9HCK8 AC116562.2-201ENST00000507042 360 ntBASIC19.34■□□□□ 0.69
CHD8Q9HCK8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD8Q9HCK8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD8Q9HCK8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD8Q9HCK8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.34■□□□□ 0.69
CHD8Q9HCK8 AC116407.4-201ENST00000623319 1061 ntBASIC19.34■□□□□ 0.69
CHD8Q9HCK8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD8Q9HCK8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.33■□□□□ 0.69
CHD8Q9HCK8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CHD8Q9HCK8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD8Q9HCK8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD8Q9HCK8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.33■□□□□ 0.69
CHD8Q9HCK8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHD8Q9HCK8 LIN28AP1-201ENST00000429574 405 ntBASIC19.33■□□□□ 0.69
CHD8Q9HCK8 ECEL1P2-202ENST00000465689 757 ntBASIC19.33■□□□□ 0.69
CHD8Q9HCK8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.33■□□□□ 0.69
CHD8Q9HCK8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CHD8Q9HCK8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CHD8Q9HCK8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.33■□□□□ 0.68
CHD8Q9HCK8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CHD8Q9HCK8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.33■□□□□ 0.68
CHD8Q9HCK8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD8Q9HCK8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.33■□□□□ 0.68
CHD8Q9HCK8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.33■□□□□ 0.68
CHD8Q9HCK8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CHD8Q9HCK8 ABCB10P4-201ENST00000566803 2184 ntBASIC19.33■□□□□ 0.68
CHD8Q9HCK8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 AC004812.2-201ENST00000611079 2094 ntBASIC19.32■□□□□ 0.68
CHD8Q9HCK8 RNF152P1-201ENST00000397754 604 ntBASIC19.32■□□□□ 0.68
CHD8Q9HCK8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.32■□□□□ 0.68
CHD8Q9HCK8 AC139530.3-201ENST00000620344 690 ntBASIC19.32■□□□□ 0.68
CHD8Q9HCK8 AL121956.5-201ENST00000625261 221 ntBASIC19.32■□□□□ 0.68
CHD8Q9HCK8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD8Q9HCK8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD8Q9HCK8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD8Q9HCK8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.31■□□□□ 0.68
CHD8Q9HCK8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.31■□□□□ 0.68
CHD8Q9HCK8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD8Q9HCK8 KRT16P5-201ENST00000455284 522 ntBASIC19.31■□□□□ 0.68
CHD8Q9HCK8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD8Q9HCK8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.31■□□□□ 0.68
CHD8Q9HCK8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD8Q9HCK8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD8Q9HCK8 NBPF21P-201ENST00000425093 1451 ntBASIC19.31■□□□□ 0.68
CHD8Q9HCK8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD8Q9HCK8 AC079089.2-201ENST00000531211 1277 ntBASIC19.31■□□□□ 0.68
CHD8Q9HCK8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD8Q9HCK8 SLC25A1P4-201ENST00000567977 778 ntBASIC19.31■□□□□ 0.68
CHD8Q9HCK8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms