Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 AC121338.2-201ENST00000622535 1744 ntBASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SND1-IT1Q9HBX3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SND1-IT1Q9HBX3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SND1-IT1Q9HBX3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SND1-IT1Q9HBX3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SND1-IT1Q9HBX3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SND1-IT1Q9HBX3 AC007225.1-201ENST00000566331 1836 ntBASIC13.71□□□□□ -0.22
SND1-IT1Q9HBX3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SND1-IT1Q9HBX3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SND1-IT1Q9HBX3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SND1-IT1Q9HBX3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SND1-IT1Q9HBX3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 KRT16P3-201ENST00000439127 1283 ntBASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 AL356740.2-201ENST00000601559 647 ntBASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 AC120498.9-201ENST00000339021 3867 ntBASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SND1-IT1Q9HBX3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 AC018445.3-201ENST00000624177 1945 ntBASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 SRD5A1P1-201ENST00000442297 786 ntBASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 RARRES2P1-201ENST00000474487 481 ntBASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 AP006587.3-201ENST00000525742 1516 ntBASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.69□□□□□ -0.22
SND1-IT1Q9HBX3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms