Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 AC135279.3-201ENST00000610945 1311 ntBASIC19.43■□□□□ 0.7
NANOGQ9H9S0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.43■□□□□ 0.7
NANOGQ9H9S0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 AC099791.1-201ENST00000416440 715 ntBASIC19.42■□□□□ 0.7
NANOGQ9H9S0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NANOGQ9H9S0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.41■□□□□ 0.7
NANOGQ9H9S0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 AC131212.1-201ENST00000613771 668 ntBASIC19.41■□□□□ 0.7
NANOGQ9H9S0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NANOGQ9H9S0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NANOGQ9H9S0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NANOGQ9H9S0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 MIR572-201ENST00000384983 95 ntBASIC19.39■□□□□ 0.69
NANOGQ9H9S0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms