Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 AC138907.5-202ENST00000569484 235 ntBASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
NUCKS1Q9H1E3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 AC120498.10-201ENST00000621827 505 ntBASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUCKS1Q9H1E3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.2■■□□□ 1.15
NUCKS1Q9H1E3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 AC245052.3-201ENST00000450182 901 ntBASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 KRT18P61-201ENST00000585825 1298 ntBASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.2■■□□□ 1.14
NUCKS1Q9H1E3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 NTF6G-201ENST00000591094 616 ntBASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 RARRES2P11-201ENST00000635158 484 ntBASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUCKS1Q9H1E3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 AL512408.1-201ENST00000569378 2000 ntBASIC22.18■■□□□ 1.14
NUCKS1Q9H1E3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NUCKS1Q9H1E3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.17■■□□□ 1.14
NUCKS1Q9H1E3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUCKS1Q9H1E3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUCKS1Q9H1E3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUCKS1Q9H1E3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.17■■□□□ 1.14
NUCKS1Q9H1E3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.17■■□□□ 1.14
NUCKS1Q9H1E3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NUCKS1Q9H1E3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NUCKS1Q9H1E3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.17■■□□□ 1.14
NUCKS1Q9H1E3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
NUCKS1Q9H1E3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.17■■□□□ 1.14
NUCKS1Q9H1E3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms