Protein–RNA interactions for Protein: Q9H0W8

SMG9, Protein SMG9, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9Q9H0W8 EP400NL-214ENST00000641289 2402 ntBASIC21.28■■□□□ 1
SMG9Q9H0W8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMG9Q9H0W8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.28■■□□□ 1
SMG9Q9H0W8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMG9Q9H0W8 AC087633.2-202ENST00000565166 1439 ntBASIC21.28■■□□□ 1
SMG9Q9H0W8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMG9Q9H0W8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.28■■□□□ 1
SMG9Q9H0W8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMG9Q9H0W8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SMG9Q9H0W8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.27■■□□□ 1
SMG9Q9H0W8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.27■■□□□ 1
SMG9Q9H0W8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
SMG9Q9H0W8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMG9Q9H0W8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMG9Q9H0W8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SMG9Q9H0W8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.27■■□□□ 1
SMG9Q9H0W8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.27■■□□□ 1
SMG9Q9H0W8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.27■■□□□ 1
SMG9Q9H0W8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SMG9Q9H0W8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.27■■□□□ 1
SMG9Q9H0W8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SMG9Q9H0W8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.27■■□□□ 1
SMG9Q9H0W8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.27■■□□□ 1
SMG9Q9H0W8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 RPPH1-201ENST00000516869 333 ntBASIC21.26■□□□□ 0.99
SMG9Q9H0W8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 FBXW4P1-201ENST00000426721 2239 ntBASIC21.26■□□□□ 0.99
SMG9Q9H0W8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMG9Q9H0W8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 KRT17P3-201ENST00000420566 1262 ntBASIC21.25■□□□□ 0.99
SMG9Q9H0W8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMG9Q9H0W8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 AC069544.1-201ENST00000609399 999 ntBASIC21.24■□□□□ 0.99
SMG9Q9H0W8 FAM197Y4-202ENST00000622692 608 ntBASIC21.24■□□□□ 0.99
SMG9Q9H0W8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.24■□□□□ 0.99
SMG9Q9H0W8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMG9Q9H0W8 AL117328.2-201ENST00000624617 1940 ntBASIC21.23■□□□□ 0.99
SMG9Q9H0W8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMG9Q9H0W8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMG9Q9H0W8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SMG9Q9H0W8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMG9Q9H0W8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SMG9Q9H0W8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMG9Q9H0W8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMG9Q9H0W8 AC008550.1-201ENST00000511500 884 ntBASIC21.23■□□□□ 0.99
SMG9Q9H0W8 RN7SL471P-201ENST00000580476 299 ntBASIC21.23■□□□□ 0.99
SMG9Q9H0W8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMG9Q9H0W8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMG9Q9H0W8 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.23■□□□□ 0.99
SMG9Q9H0W8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms