Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.59■□□□□ 0.89
CLPBQ9H078 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLPBQ9H078 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPBQ9H078 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPBQ9H078 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLPBQ9H078 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.58■□□□□ 0.89
CLPBQ9H078 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLPBQ9H078 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLPBQ9H078 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CLPBQ9H078 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CLPBQ9H078 MIPEPP3-201ENST00000412105 444 ntBASIC20.58■□□□□ 0.89
CLPBQ9H078 TSPY20P-201ENST00000450910 630 ntBASIC20.58■□□□□ 0.89
CLPBQ9H078 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLPBQ9H078 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.58■□□□□ 0.89
CLPBQ9H078 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.58■□□□□ 0.89
CLPBQ9H078 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLPBQ9H078 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.58■□□□□ 0.88
CLPBQ9H078 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLPBQ9H078 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLPBQ9H078 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLPBQ9H078 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.58■□□□□ 0.88
CLPBQ9H078 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.58■□□□□ 0.88
CLPBQ9H078 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLPBQ9H078 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CLPBQ9H078 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLPBQ9H078 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLPBQ9H078 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLPBQ9H078 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CLPBQ9H078 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLPBQ9H078 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLPBQ9H078 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.57■□□□□ 0.88
CLPBQ9H078 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.57■□□□□ 0.88
CLPBQ9H078 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.57■□□□□ 0.88
CLPBQ9H078 AC069236.1-201ENST00000604339 616 ntBASIC20.57■□□□□ 0.88
CLPBQ9H078 AC008694.1-202ENST00000636953 945 ntBASIC20.57■□□□□ 0.88
CLPBQ9H078 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLPBQ9H078 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.57■□□□□ 0.88
CLPBQ9H078 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.56■□□□□ 0.88
CLPBQ9H078 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.56■□□□□ 0.88
CLPBQ9H078 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLPBQ9H078 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.56■□□□□ 0.88
CLPBQ9H078 AL512625.2-201ENST00000417533 625 ntBASIC20.56■□□□□ 0.88
CLPBQ9H078 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.56■□□□□ 0.88
CLPBQ9H078 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CLPBQ9H078 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 AC243732.1-201ENST00000612648 864 ntBASIC20.56■□□□□ 0.88
CLPBQ9H078 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.56■□□□□ 0.88
CLPBQ9H078 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPBQ9H078 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.56■□□□□ 0.88
CLPBQ9H078 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.55■□□□□ 0.88
CLPBQ9H078 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPBQ9H078 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CLPBQ9H078 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPBQ9H078 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPBQ9H078 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.55■□□□□ 0.88
CLPBQ9H078 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.55■□□□□ 0.88
CLPBQ9H078 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.55■□□□□ 0.88
CLPBQ9H078 MIR4758-201ENST00000577688 71 ntBASIC20.55■□□□□ 0.88
CLPBQ9H078 MIR4651-201ENST00000582622 73 ntBASIC20.55■□□□□ 0.88
CLPBQ9H078 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
CLPBQ9H078 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.55■□□□□ 0.88
CLPBQ9H078 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLPBQ9H078 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLPBQ9H078 AC121338.2-201ENST00000622535 1744 ntBASIC20.55■□□□□ 0.88
CLPBQ9H078 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPBQ9H078 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.55■□□□□ 0.88
CLPBQ9H078 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CLPBQ9H078 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CLPBQ9H078 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CLPBQ9H078 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.54■□□□□ 0.88
CLPBQ9H078 AL591742.1-201ENST00000604433 565 ntBASIC20.54■□□□□ 0.88
CLPBQ9H078 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLPBQ9H078 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CLPBQ9H078 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPBQ9H078 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms