Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL158211.5-201ENST00000623583 2518 ntBASIC18.22■□□□□ 0.51
USB1Q9BQ65 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.22■□□□□ 0.51
USB1Q9BQ65 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USB1Q9BQ65 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.22■□□□□ 0.51
USB1Q9BQ65 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USB1Q9BQ65 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
USB1Q9BQ65 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USB1Q9BQ65 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.22■□□□□ 0.51
USB1Q9BQ65 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USB1Q9BQ65 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
USB1Q9BQ65 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.22■□□□□ 0.51
USB1Q9BQ65 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.22■□□□□ 0.51
USB1Q9BQ65 AL138781.1-201ENST00000566567 1274 ntBASIC18.22■□□□□ 0.51
USB1Q9BQ65 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
USB1Q9BQ65 AC100791.3-201ENST00000617619 330 ntBASIC18.22■□□□□ 0.51
USB1Q9BQ65 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USB1Q9BQ65 MKRN4P-201ENST00000444706 1521 ntBASIC18.22■□□□□ 0.51
USB1Q9BQ65 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USB1Q9BQ65 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.22■□□□□ 0.51
USB1Q9BQ65 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USB1Q9BQ65 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USB1Q9BQ65 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USB1Q9BQ65 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.22■□□□□ 0.51
USB1Q9BQ65 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USB1Q9BQ65 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 AC010542.4-201ENST00000563151 1910 ntBASIC18.21■□□□□ 0.51
USB1Q9BQ65 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.21■□□□□ 0.51
USB1Q9BQ65 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.21■□□□□ 0.51
USB1Q9BQ65 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.21■□□□□ 0.51
USB1Q9BQ65 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.21■□□□□ 0.51
USB1Q9BQ65 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.21■□□□□ 0.51
USB1Q9BQ65 GUSBP6-202ENST00000438529 1198 ntBASIC18.21■□□□□ 0.51
USB1Q9BQ65 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.21■□□□□ 0.51
USB1Q9BQ65 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.21■□□□□ 0.51
USB1Q9BQ65 RARRES2P4-201ENST00000514074 484 ntBASIC18.21■□□□□ 0.51
USB1Q9BQ65 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
USB1Q9BQ65 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.21■□□□□ 0.51
USB1Q9BQ65 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.21■□□□□ 0.51
USB1Q9BQ65 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USB1Q9BQ65 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.21■□□□□ 0.5
USB1Q9BQ65 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USB1Q9BQ65 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USB1Q9BQ65 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USB1Q9BQ65 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USB1Q9BQ65 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USB1Q9BQ65 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
USB1Q9BQ65 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.2■□□□□ 0.5
USB1Q9BQ65 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USB1Q9BQ65 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USB1Q9BQ65 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 FBXW4P1-201ENST00000426721 2239 ntBASIC18.2■□□□□ 0.5
USB1Q9BQ65 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
USB1Q9BQ65 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
USB1Q9BQ65 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
USB1Q9BQ65 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.19■□□□□ 0.5
USB1Q9BQ65 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
USB1Q9BQ65 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
USB1Q9BQ65 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.19■□□□□ 0.5
USB1Q9BQ65 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USB1Q9BQ65 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
USB1Q9BQ65 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USB1Q9BQ65 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.19■□□□□ 0.5
USB1Q9BQ65 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.19■□□□□ 0.5
USB1Q9BQ65 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.19■□□□□ 0.5
USB1Q9BQ65 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USB1Q9BQ65 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.19■□□□□ 0.5
USB1Q9BQ65 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
USB1Q9BQ65 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USB1Q9BQ65 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USB1Q9BQ65 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.18■□□□□ 0.5
USB1Q9BQ65 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USB1Q9BQ65 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USB1Q9BQ65 AC069152.1-201ENST00000438030 544 ntBASIC18.18■□□□□ 0.5
USB1Q9BQ65 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.18■□□□□ 0.5
USB1Q9BQ65 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms