Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AL358472.4-201ENST00000633140 710 ntBASIC20.78■□□□□ 0.92
PHOX2BQ99453 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PHOX2BQ99453 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PHOX2BQ99453 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.78■□□□□ 0.92
PHOX2BQ99453 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PHOX2BQ99453 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHOX2BQ99453 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PHOX2BQ99453 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.78■□□□□ 0.92
PHOX2BQ99453 OR7E47P-201ENST00000546390 1422 ntBASIC20.78■□□□□ 0.92
PHOX2BQ99453 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.77■□□□□ 0.92
PHOX2BQ99453 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHOX2BQ99453 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PHOX2BQ99453 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHOX2BQ99453 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHOX2BQ99453 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHOX2BQ99453 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHOX2BQ99453 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.77■□□□□ 0.92
PHOX2BQ99453 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHOX2BQ99453 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHOX2BQ99453 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.77■□□□□ 0.92
PHOX2BQ99453 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHOX2BQ99453 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHOX2BQ99453 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHOX2BQ99453 KRT16P2-201ENST00000414673 1423 ntBASIC20.77■□□□□ 0.91
PHOX2BQ99453 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PHOX2BQ99453 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PHOX2BQ99453 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PHOX2BQ99453 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PHOX2BQ99453 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 LINC01568-207ENST00000641790 1380 ntBASIC20.76■□□□□ 0.91
PHOX2BQ99453 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHOX2BQ99453 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHOX2BQ99453 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHOX2BQ99453 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHOX2BQ99453 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PHOX2BQ99453 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PHOX2BQ99453 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PHOX2BQ99453 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.76■□□□□ 0.91
PHOX2BQ99453 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.76■□□□□ 0.91
PHOX2BQ99453 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PHOX2BQ99453 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHOX2BQ99453 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PHOX2BQ99453 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 AC100791.3-201ENST00000617619 330 ntBASIC20.75■□□□□ 0.91
PHOX2BQ99453 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHOX2BQ99453 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHOX2BQ99453 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PHOX2BQ99453 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHOX2BQ99453 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PHOX2BQ99453 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PHOX2BQ99453 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.74■□□□□ 0.91
PHOX2BQ99453 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PHOX2BQ99453 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.74■□□□□ 0.91
PHOX2BQ99453 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.74■□□□□ 0.91
PHOX2BQ99453 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHOX2BQ99453 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHOX2BQ99453 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHOX2BQ99453 CRYGFP-201ENST00000418459 633 ntBASIC20.74■□□□□ 0.91
PHOX2BQ99453 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHOX2BQ99453 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHOX2BQ99453 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHOX2BQ99453 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHOX2BQ99453 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHOX2BQ99453 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.74■□□□□ 0.91
PHOX2BQ99453 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHOX2BQ99453 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.74■□□□□ 0.91
PHOX2BQ99453 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PHOX2BQ99453 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHOX2BQ99453 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHOX2BQ99453 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHOX2BQ99453 ANOS2P-203ENST00000472227 1816 ntBASIC20.74■□□□□ 0.91
PHOX2BQ99453 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.74■□□□□ 0.91
PHOX2BQ99453 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms