Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BBS4Q96RK4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BBS4Q96RK4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BBS4Q96RK4 AC116050.2-201ENST00000612102 1779 ntBASIC19.42■□□□□ 0.7
BBS4Q96RK4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BBS4Q96RK4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 AC007225.1-201ENST00000566331 1836 ntBASIC19.41■□□□□ 0.7
BBS4Q96RK4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
BBS4Q96RK4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BBS4Q96RK4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.41■□□□□ 0.7
BBS4Q96RK4 AC026271.2-201ENST00000428091 497 ntBASIC19.41■□□□□ 0.7
BBS4Q96RK4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.41■□□□□ 0.7
BBS4Q96RK4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
BBS4Q96RK4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.41■□□□□ 0.7
BBS4Q96RK4 AC243732.1-201ENST00000612648 864 ntBASIC19.41■□□□□ 0.7
BBS4Q96RK4 MYCNOS-205ENST00000641950 531 ntBASIC19.41■□□□□ 0.7
BBS4Q96RK4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
BBS4Q96RK4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 FP700111.2-201ENST00000619190 1892 ntBASIC19.41■□□□□ 0.7
BBS4Q96RK4 RBM17P2-201ENST00000616397 1405 ntBASIC19.41■□□□□ 0.7
BBS4Q96RK4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BBS4Q96RK4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.4■□□□□ 0.7
BBS4Q96RK4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
BBS4Q96RK4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BBS4Q96RK4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BBS4Q96RK4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
BBS4Q96RK4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
BBS4Q96RK4 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.4■□□□□ 0.7
BBS4Q96RK4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BBS4Q96RK4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BBS4Q96RK4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.4■□□□□ 0.7
BBS4Q96RK4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BBS4Q96RK4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.39■□□□□ 0.7
BBS4Q96RK4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BBS4Q96RK4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.39■□□□□ 0.7
BBS4Q96RK4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
BBS4Q96RK4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.39■□□□□ 0.7
BBS4Q96RK4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.39■□□□□ 0.7
BBS4Q96RK4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
BBS4Q96RK4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BBS4Q96RK4 FEM1AP1-201ENST00000431297 1995 ntBASIC19.39■□□□□ 0.7
BBS4Q96RK4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.39■□□□□ 0.69
BBS4Q96RK4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
BBS4Q96RK4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BBS4Q96RK4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
BBS4Q96RK4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.39■□□□□ 0.69
BBS4Q96RK4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.39■□□□□ 0.69
BBS4Q96RK4 KRT18P5-201ENST00000436075 1291 ntBASIC19.39■□□□□ 0.69
BBS4Q96RK4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.39■□□□□ 0.69
BBS4Q96RK4 AC137761.2-201ENST00000561729 223 ntBASIC19.39■□□□□ 0.69
BBS4Q96RK4 AC145350.3-201ENST00000569033 163 ntBASIC19.39■□□□□ 0.69
BBS4Q96RK4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.39■□□□□ 0.69
BBS4Q96RK4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BBS4Q96RK4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
BBS4Q96RK4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
BBS4Q96RK4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.39■□□□□ 0.69
BBS4Q96RK4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BBS4Q96RK4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BBS4Q96RK4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BBS4Q96RK4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.39■□□□□ 0.69
BBS4Q96RK4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BBS4Q96RK4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
BBS4Q96RK4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BBS4Q96RK4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BBS4Q96RK4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
BBS4Q96RK4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.38■□□□□ 0.69
BBS4Q96RK4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.38■□□□□ 0.69
BBS4Q96RK4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.38■□□□□ 0.69
BBS4Q96RK4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.38■□□□□ 0.69
BBS4Q96RK4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BBS4Q96RK4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BBS4Q96RK4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
BBS4Q96RK4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS4Q96RK4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS4Q96RK4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.37■□□□□ 0.69
BBS4Q96RK4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS4Q96RK4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.37■□□□□ 0.69
BBS4Q96RK4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.37■□□□□ 0.69
BBS4Q96RK4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.37■□□□□ 0.69
BBS4Q96RK4 AC091799.1-201ENST00000422823 811 ntBASIC19.37■□□□□ 0.69
BBS4Q96RK4 KRT18P11-201ENST00000435214 1283 ntBASIC19.37■□□□□ 0.69
BBS4Q96RK4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BBS4Q96RK4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.37■□□□□ 0.69
BBS4Q96RK4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
BBS4Q96RK4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BBS4Q96RK4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
BBS4Q96RK4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BBS4Q96RK4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS4Q96RK4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms