Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 AC012618.2-201ENST00000428058 849 ntBASIC21.91■■□□□ 1.1
ZNF558Q96NG5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.91■■□□□ 1.1
ZNF558Q96NG5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 AC124016.1-201ENST00000609552 612 ntBASIC21.91■■□□□ 1.1
ZNF558Q96NG5 AC006557.6-201ENST00000623071 864 ntBASIC21.91■■□□□ 1.1
ZNF558Q96NG5 AL023875.1-201ENST00000640777 796 ntBASIC21.91■■□□□ 1.1
ZNF558Q96NG5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.91■■□□□ 1.1
ZNF558Q96NG5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 AL390719.1-204ENST00000412397 1219 ntBASIC21.9■■□□□ 1.1
ZNF558Q96NG5 AC239809.2-201ENST00000415381 517 ntBASIC21.9■■□□□ 1.1
ZNF558Q96NG5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF558Q96NG5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
ZNF558Q96NG5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.89■■□□□ 1.1
ZNF558Q96NG5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.89■■□□□ 1.1
ZNF558Q96NG5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 AC133681.1-201ENST00000465482 601 ntBASIC21.89■■□□□ 1.09
ZNF558Q96NG5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.89■■□□□ 1.09
ZNF558Q96NG5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF558Q96NG5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF558Q96NG5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF558Q96NG5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.88■■□□□ 1.09
ZNF558Q96NG5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF558Q96NG5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
ZNF558Q96NG5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF558Q96NG5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF558Q96NG5 RPS2P55-201ENST00000397318 883 ntBASIC21.88■■□□□ 1.09
ZNF558Q96NG5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.88■■□□□ 1.09
ZNF558Q96NG5 AC107956.1-201ENST00000494359 873 ntBASIC21.88■■□□□ 1.09
ZNF558Q96NG5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.88■■□□□ 1.09
ZNF558Q96NG5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.88■■□□□ 1.09
ZNF558Q96NG5 AC233702.5-201ENST00000584107 538 ntBASIC21.88■■□□□ 1.09
ZNF558Q96NG5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.88■■□□□ 1.09
ZNF558Q96NG5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF558Q96NG5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF558Q96NG5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ZNF558Q96NG5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms