Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHDQ96IW2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHDQ96IW2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHDQ96IW2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.86■□□□□ 0.93
SHDQ96IW2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHDQ96IW2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHDQ96IW2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.86■□□□□ 0.93
SHDQ96IW2 AP003071.4-201ENST00000562276 1284 ntBASIC20.86■□□□□ 0.93
SHDQ96IW2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.86■□□□□ 0.93
SHDQ96IW2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.86■□□□□ 0.93
SHDQ96IW2 AL590326.2-201ENST00000625139 305 ntBASIC20.86■□□□□ 0.93
SHDQ96IW2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHDQ96IW2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SHDQ96IW2 AC010542.4-201ENST00000563151 1910 ntBASIC20.86■□□□□ 0.93
SHDQ96IW2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHDQ96IW2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHDQ96IW2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHDQ96IW2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.85■□□□□ 0.93
SHDQ96IW2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHDQ96IW2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHDQ96IW2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHDQ96IW2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHDQ96IW2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SHDQ96IW2 ARMC10P1-201ENST00000313754 855 ntBASIC20.85■□□□□ 0.93
SHDQ96IW2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SHDQ96IW2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHDQ96IW2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.85■□□□□ 0.93
SHDQ96IW2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.85■□□□□ 0.93
SHDQ96IW2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.85■□□□□ 0.93
SHDQ96IW2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHDQ96IW2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.85■□□□□ 0.93
SHDQ96IW2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHDQ96IW2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHDQ96IW2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SHDQ96IW2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHDQ96IW2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHDQ96IW2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SHDQ96IW2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHDQ96IW2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.84■□□□□ 0.93
SHDQ96IW2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHDQ96IW2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHDQ96IW2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.84■□□□□ 0.93
SHDQ96IW2 AL353807.1-201ENST00000427475 662 ntBASIC20.84■□□□□ 0.93
SHDQ96IW2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.84■□□□□ 0.93
SHDQ96IW2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.84■□□□□ 0.93
SHDQ96IW2 AL353708.3-201ENST00000610272 989 ntBASIC20.84■□□□□ 0.93
SHDQ96IW2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHDQ96IW2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
SHDQ96IW2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHDQ96IW2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHDQ96IW2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.84■□□□□ 0.93
SHDQ96IW2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHDQ96IW2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SHDQ96IW2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHDQ96IW2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHDQ96IW2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHDQ96IW2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHDQ96IW2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHDQ96IW2 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.83■□□□□ 0.93
SHDQ96IW2 KRT18P35-201ENST00000510488 1269 ntBASIC20.83■□□□□ 0.93
SHDQ96IW2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.83■□□□□ 0.93
SHDQ96IW2 RN7SL850P-201ENST00000579959 291 ntBASIC20.83■□□□□ 0.93
SHDQ96IW2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.83■□□□□ 0.93
SHDQ96IW2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHDQ96IW2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SHDQ96IW2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SHDQ96IW2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SHDQ96IW2 AC026471.6-201ENST00000622954 1905 ntBASIC20.82■□□□□ 0.92
SHDQ96IW2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.82■□□□□ 0.92
SHDQ96IW2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.82■□□□□ 0.92
SHDQ96IW2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.82■□□□□ 0.92
SHDQ96IW2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.82■□□□□ 0.92
SHDQ96IW2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.82■□□□□ 0.92
SHDQ96IW2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.82■□□□□ 0.92
SHDQ96IW2 AL049597.2-201ENST00000565575 961 ntBASIC20.82■□□□□ 0.92
SHDQ96IW2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.82■□□□□ 0.92
SHDQ96IW2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.82■□□□□ 0.92
SHDQ96IW2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHDQ96IW2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.82■□□□□ 0.92
SHDQ96IW2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.81■□□□□ 0.92
SHDQ96IW2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHDQ96IW2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SHDQ96IW2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.81■□□□□ 0.92
SHDQ96IW2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.81■□□□□ 0.92
SHDQ96IW2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHDQ96IW2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms