Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ECHDC3Q96DC8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ECHDC3Q96DC8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ECHDC3Q96DC8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.58■□□□□ 0.88
ECHDC3Q96DC8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 PGM5P4-201ENST00000421970 445 ntBASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 AC091874.3-201ENST00000512672 1195 ntBASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 MIR2861-201ENST00000636310 90 ntBASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ECHDC3Q96DC8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 DUSP5P2-201ENST00000426873 1033 ntBASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ECHDC3Q96DC8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 AL356652.1-201ENST00000615962 565 ntBASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
ECHDC3Q96DC8 AC006128.1-201ENST00000624704 1661 ntBASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.54■□□□□ 0.88
ECHDC3Q96DC8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 AC083880.1-201ENST00000608266 535 ntBASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.53■□□□□ 0.88
ECHDC3Q96DC8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms