Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCAMP4Q969E2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCAMP4Q969E2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SCAMP4Q969E2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.4■□□□□ 0.86
SCAMP4Q969E2 MIR4758-201ENST00000577688 71 ntBASIC20.4■□□□□ 0.86
SCAMP4Q969E2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.4■□□□□ 0.86
SCAMP4Q969E2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCAMP4Q969E2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCAMP4Q969E2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCAMP4Q969E2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SCAMP4Q969E2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.86
SCAMP4Q969E2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCAMP4Q969E2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SCAMP4Q969E2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
SCAMP4Q969E2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SCAMP4Q969E2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCAMP4Q969E2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SCAMP4Q969E2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.39■□□□□ 0.86
SCAMP4Q969E2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 KRT18P68-201ENST00000392293 1000 ntBASIC20.39■□□□□ 0.85
SCAMP4Q969E2 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.39■□□□□ 0.85
SCAMP4Q969E2 AC069152.1-201ENST00000438030 544 ntBASIC20.39■□□□□ 0.85
SCAMP4Q969E2 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 AC092118.2-201ENST00000613495 667 ntBASIC20.39■□□□□ 0.85
SCAMP4Q969E2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCAMP4Q969E2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 LSM12P1-201ENST00000411836 588 ntBASIC20.38■□□□□ 0.85
SCAMP4Q969E2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCAMP4Q969E2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 AC027702.1-201ENST00000563810 1770 ntBASIC20.37■□□□□ 0.85
SCAMP4Q969E2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.37■□□□□ 0.85
SCAMP4Q969E2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 AC133041.1-202ENST00000642053 222 ntBASIC20.37■□□□□ 0.85
SCAMP4Q969E2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCAMP4Q969E2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 AC073210.2-201ENST00000430369 194 ntBASIC20.36■□□□□ 0.85
SCAMP4Q969E2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.36■□□□□ 0.85
SCAMP4Q969E2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms