Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 CYP21A1P-202ENST00000354927 1481 ntBASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNEP1R1Q8N9A8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.21■□□□□ 0.51
CNEP1R1Q8N9A8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 POU5F1P3-201ENST00000428824 1078 ntBASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CNEP1R1Q8N9A8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms