Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.33■□□□□ 0.84
TRAM1L1Q8N609 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAM1L1Q8N609 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAM1L1Q8N609 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
TRAM1L1Q8N609 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.33■□□□□ 0.84
TRAM1L1Q8N609 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 AC142086.2-201ENST00000569753 217 ntBASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 MIR2861-201ENST00000636310 90 ntBASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 AL137060.1-201ENST00000618151 2648 ntBASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAM1L1Q8N609 PKD1P6-201ENST00000343738 4769 ntBASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TRAM1L1Q8N609 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 CLDN5-201ENST00000403084 2357 ntBASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 AL138781.1-201ENST00000566567 1274 ntBASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 AC092118.2-201ENST00000613495 667 ntBASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 AL589743.5-201ENST00000616611 1050 ntBASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 KRT17P1-201ENST00000399211 1546 ntBASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAM1L1Q8N609 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 AL355802.2-201ENST00000402069 882 ntBASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 LSM12P1-201ENST00000411836 588 ntBASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 MIR4758-201ENST00000577688 71 ntBASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 AL356652.1-201ENST00000615962 565 ntBASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 AC105020.6-201ENST00000621523 1217 ntBASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAM1L1Q8N609 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms