Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39CQ8N584 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39CQ8N584 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39CQ8N584 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39CQ8N584 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39CQ8N584 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.84■■□□□ 1.09
TTC39CQ8N584 AC105036.2-201ENST00000569468 176 ntBASIC21.84■■□□□ 1.09
TTC39CQ8N584 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.84■■□□□ 1.09
TTC39CQ8N584 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TTC39CQ8N584 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TTC39CQ8N584 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.84■■□□□ 1.09
TTC39CQ8N584 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.83■■□□□ 1.09
TTC39CQ8N584 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39CQ8N584 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39CQ8N584 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39CQ8N584 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
TTC39CQ8N584 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39CQ8N584 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TTC39CQ8N584 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.83■■□□□ 1.09
TTC39CQ8N584 AC083906.2-201ENST00000511578 360 ntBASIC21.83■■□□□ 1.09
TTC39CQ8N584 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TTC39CQ8N584 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39CQ8N584 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.83■■□□□ 1.09
TTC39CQ8N584 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39CQ8N584 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TTC39CQ8N584 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TTC39CQ8N584 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TTC39CQ8N584 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
TTC39CQ8N584 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.82■■□□□ 1.08
TTC39CQ8N584 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.82■■□□□ 1.08
TTC39CQ8N584 GPX1P1-201ENST00000388829 606 ntBASIC21.82■■□□□ 1.08
TTC39CQ8N584 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.82■■□□□ 1.08
TTC39CQ8N584 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TTC39CQ8N584 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.82■■□□□ 1.08
TTC39CQ8N584 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.82■■□□□ 1.08
TTC39CQ8N584 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.82■■□□□ 1.08
TTC39CQ8N584 CYP2T3P-201ENST00000601990 817 ntBASIC21.82■■□□□ 1.08
TTC39CQ8N584 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39CQ8N584 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.82■■□□□ 1.08
TTC39CQ8N584 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.82■■□□□ 1.08
TTC39CQ8N584 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.82■■□□□ 1.08
TTC39CQ8N584 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39CQ8N584 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39CQ8N584 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39CQ8N584 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39CQ8N584 MKRN4P-201ENST00000444706 1521 ntBASIC21.81■■□□□ 1.08
TTC39CQ8N584 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.81■■□□□ 1.08
TTC39CQ8N584 AC007225.1-201ENST00000566331 1836 ntBASIC21.81■■□□□ 1.08
TTC39CQ8N584 KRT18P68-201ENST00000392293 1000 ntBASIC21.81■■□□□ 1.08
TTC39CQ8N584 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39CQ8N584 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.81■■□□□ 1.08
TTC39CQ8N584 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39CQ8N584 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.81■■□□□ 1.08
TTC39CQ8N584 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39CQ8N584 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TTC39CQ8N584 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39CQ8N584 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39CQ8N584 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.8■■□□□ 1.08
TTC39CQ8N584 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39CQ8N584 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39CQ8N584 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39CQ8N584 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39CQ8N584 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.8■■□□□ 1.08
TTC39CQ8N584 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.8■■□□□ 1.08
TTC39CQ8N584 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39CQ8N584 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
TTC39CQ8N584 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39CQ8N584 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.8■■□□□ 1.08
TTC39CQ8N584 AC093787.1-201ENST00000450396 207 ntBASIC21.8■■□□□ 1.08
TTC39CQ8N584 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.8■■□□□ 1.08
TTC39CQ8N584 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.8■■□□□ 1.08
TTC39CQ8N584 AL356652.1-201ENST00000615962 565 ntBASIC21.8■■□□□ 1.08
TTC39CQ8N584 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.8■■□□□ 1.08
TTC39CQ8N584 AL589743.5-201ENST00000616611 1050 ntBASIC21.8■■□□□ 1.08
TTC39CQ8N584 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
TTC39CQ8N584 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.8■■□□□ 1.08
TTC39CQ8N584 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.8■■□□□ 1.08
TTC39CQ8N584 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39CQ8N584 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
TTC39CQ8N584 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39CQ8N584 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39CQ8N584 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39CQ8N584 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39CQ8N584 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.79■■□□□ 1.08
TTC39CQ8N584 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39CQ8N584 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39CQ8N584 SLC29A4P1-201ENST00000398760 971 ntBASIC21.79■■□□□ 1.08
TTC39CQ8N584 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.79■■□□□ 1.08
TTC39CQ8N584 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.79■■□□□ 1.08
TTC39CQ8N584 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.79■■□□□ 1.08
TTC39CQ8N584 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
TTC39CQ8N584 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.79■■□□□ 1.08
TTC39CQ8N584 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39CQ8N584 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39CQ8N584 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TTC39CQ8N584 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39CQ8N584 KRT8P36-201ENST00000489121 1440 ntBASIC21.79■■□□□ 1.08
TTC39CQ8N584 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
TTC39CQ8N584 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.78■■□□□ 1.08
TTC39CQ8N584 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms