Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
XRN1Q8IZH2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
XRN1Q8IZH2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC28.83■■■□□ 2.21
XRN1Q8IZH2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
XRN1Q8IZH2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
XRN1Q8IZH2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
XRN1Q8IZH2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
XRN1Q8IZH2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
XRN1Q8IZH2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
XRN1Q8IZH2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
XRN1Q8IZH2 PGM5P4-201ENST00000421970 445 ntBASIC28.83■■■□□ 2.21
XRN1Q8IZH2 HES2-206ENST00000489730 730 ntTSL 2 BASIC28.83■■■□□ 2.21
XRN1Q8IZH2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
XRN1Q8IZH2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
XRN1Q8IZH2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
XRN1Q8IZH2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
XRN1Q8IZH2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC28.82■■■□□ 2.2
XRN1Q8IZH2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC28.82■■■□□ 2.2
XRN1Q8IZH2 AP003071.4-201ENST00000562276 1284 ntBASIC28.82■■■□□ 2.2
XRN1Q8IZH2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
XRN1Q8IZH2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC28.82■■■□□ 2.2
XRN1Q8IZH2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC28.81■■■□□ 2.2
XRN1Q8IZH2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
XRN1Q8IZH2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC28.79■■■□□ 2.2
XRN1Q8IZH2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
XRN1Q8IZH2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC28.79■■■□□ 2.2
XRN1Q8IZH2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
XRN1Q8IZH2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC28.79■■■□□ 2.2
XRN1Q8IZH2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC28.79■■■□□ 2.2
XRN1Q8IZH2 MIR6786-201ENST00000616843 113 ntBASIC28.79■■■□□ 2.2
XRN1Q8IZH2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
XRN1Q8IZH2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
XRN1Q8IZH2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
XRN1Q8IZH2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
XRN1Q8IZH2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
XRN1Q8IZH2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
XRN1Q8IZH2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
XRN1Q8IZH2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC28.78■■■□□ 2.2
XRN1Q8IZH2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC28.78■■■□□ 2.2
XRN1Q8IZH2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC28.78■■■□□ 2.2
XRN1Q8IZH2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC28.78■■■□□ 2.2
XRN1Q8IZH2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
XRN1Q8IZH2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 KRT8P9-201ENST00000558927 1449 ntBASIC28.77■■■□□ 2.2
XRN1Q8IZH2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC28.77■■■□□ 2.2
XRN1Q8IZH2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC28.76■■■□□ 2.2
XRN1Q8IZH2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
XRN1Q8IZH2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
XRN1Q8IZH2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC28.76■■■□□ 2.19
XRN1Q8IZH2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
XRN1Q8IZH2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
XRN1Q8IZH2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
XRN1Q8IZH2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
XRN1Q8IZH2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC28.76■■■□□ 2.19
XRN1Q8IZH2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC28.76■■■□□ 2.19
XRN1Q8IZH2 AF186192.3-201ENST00000583427 947 ntBASIC28.76■■■□□ 2.19
XRN1Q8IZH2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
XRN1Q8IZH2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
XRN1Q8IZH2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
XRN1Q8IZH2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
XRN1Q8IZH2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
XRN1Q8IZH2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC28.75■■■□□ 2.19
XRN1Q8IZH2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
XRN1Q8IZH2 NUDT16P1-203ENST00000513809 620 ntBASIC28.75■■■□□ 2.19
XRN1Q8IZH2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC28.75■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms