Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKL3Q8IVW4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.07■□□□□ 0.96
CDKL3Q8IVW4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.07■□□□□ 0.96
CDKL3Q8IVW4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKL3Q8IVW4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CDKL3Q8IVW4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.07■□□□□ 0.96
CDKL3Q8IVW4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKL3Q8IVW4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDKL3Q8IVW4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKL3Q8IVW4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 AC091799.1-201ENST00000422823 811 ntBASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDKL3Q8IVW4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 UBE2DNL-204ENST00000602536 740 ntBASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.05■□□□□ 0.96
CDKL3Q8IVW4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 AC007322.3-201ENST00000426526 701 ntBASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 AC034268.1-201ENST00000441047 882 ntBASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 MIR2861-201ENST00000636310 90 ntBASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.04■□□□□ 0.96
CDKL3Q8IVW4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 AC092720.2-201ENST00000602388 1665 ntBASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 AL121603.2-201ENST00000557373 2117 ntBASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 MYCNOS-205ENST00000641950 531 ntBASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDKL3Q8IVW4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms