Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
LRRC28Q86X40 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LRRC28Q86X40 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC28Q86X40 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 SMG8-203ENST00000578922 2178 ntBASIC18.2■□□□□ 0.5
LRRC28Q86X40 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRC28Q86X40 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.2■□□□□ 0.5
LRRC28Q86X40 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC28Q86X40 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LRRC28Q86X40 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC28Q86X40 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC28Q86X40 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC28Q86X40 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC28Q86X40 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC28Q86X40 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC28Q86X40 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC28Q86X40 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRRC28Q86X40 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRRC28Q86X40 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.19■□□□□ 0.5
LRRC28Q86X40 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC28Q86X40 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC28Q86X40 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC28Q86X40 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC28Q86X40 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC28Q86X40 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LRRC28Q86X40 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC28Q86X40 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC28Q86X40 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC28Q86X40 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC28Q86X40 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC28Q86X40 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC28Q86X40 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC28Q86X40 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC28Q86X40 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC28Q86X40 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC28Q86X40 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC28Q86X40 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
LRRC28Q86X40 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC28Q86X40 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC28Q86X40 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.18■□□□□ 0.5
LRRC28Q86X40 SMUG1P1-201ENST00000590640 811 ntBASIC18.18■□□□□ 0.5
LRRC28Q86X40 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC28Q86X40 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.18■□□□□ 0.5
LRRC28Q86X40 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC28Q86X40 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRRC28Q86X40 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC28Q86X40 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRRC28Q86X40 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC28Q86X40 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC28Q86X40 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC28Q86X40 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC28Q86X40 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC28Q86X40 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC28Q86X40 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LRRC28Q86X40 AC003102.1-202ENST00000563394 1796 ntBASIC18.17■□□□□ 0.5
LRRC28Q86X40 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC28Q86X40 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC28Q86X40 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC28Q86X40 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC28Q86X40 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC28Q86X40 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LRRC28Q86X40 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC28Q86X40 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC28Q86X40 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.17■□□□□ 0.5
LRRC28Q86X40 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.17■□□□□ 0.5
LRRC28Q86X40 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC28Q86X40 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC28Q86X40 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC28Q86X40 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC28Q86X40 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC28Q86X40 LINC02228-203ENST00000641970 1355 ntBASIC18.17■□□□□ 0.5
LRRC28Q86X40 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC28Q86X40 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
LRRC28Q86X40 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
LRRC28Q86X40 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC28Q86X40 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC28Q86X40 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC28Q86X40 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC28Q86X40 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRRC28Q86X40 AC034268.1-201ENST00000441047 882 ntBASIC18.16■□□□□ 0.5
LRRC28Q86X40 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC28Q86X40 BX005040.4-201ENST00000637145 1518 ntBASIC18.16■□□□□ 0.5
LRRC28Q86X40 BX323043.1-201ENST00000641006 1765 ntBASIC18.16■□□□□ 0.5
LRRC28Q86X40 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC28Q86X40 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms