Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 ZNRF2P3-201ENST00000424200 374 ntBASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3HC1Q86WB0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZC3HC1Q86WB0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
ZC3HC1Q86WB0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZC3HC1Q86WB0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.39■□□□□ 0.86
ZC3HC1Q86WB0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZC3HC1Q86WB0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZC3HC1Q86WB0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZC3HC1Q86WB0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZC3HC1Q86WB0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 AC243732.1-201ENST00000612648 864 ntBASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 MIR2861-201ENST00000636310 90 ntBASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 AC099778.1-201ENST00000568593 1911 ntBASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.39■□□□□ 0.85
ZC3HC1Q86WB0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 PCDHAC2-203ENST00000615316 3011 ntBASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 RBM17P2-201ENST00000616397 1405 ntBASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ZC3HC1Q86WB0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 AC112907.3-201ENST00000577781 2400 ntBASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 AC091799.1-201ENST00000422823 811 ntBASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 SLC7A5P1-201ENST00000568957 537 ntBASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3HC1Q86WB0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 KRT18P61-201ENST00000585825 1298 ntBASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ZC3HC1Q86WB0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms