Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 Z82202.1-201ENST00000623446 1880 ntBASIC17.87■□□□□ 0.45
CCDC190Q86UF4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 AL049812.1-201ENST00000432563 2267 ntBASIC17.86■□□□□ 0.45
CCDC190Q86UF4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 AP006587.3-201ENST00000525742 1516 ntBASIC17.86■□□□□ 0.45
CCDC190Q86UF4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 AL138781.2-201ENST00000617896 1843 ntBASIC17.86■□□□□ 0.45
CCDC190Q86UF4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC190Q86UF4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC190Q86UF4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC190Q86UF4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC190Q86UF4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC190Q86UF4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC190Q86UF4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC190Q86UF4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC190Q86UF4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC190Q86UF4 AL451085.2-201ENST00000605085 799 ntBASIC17.85■□□□□ 0.45
CCDC190Q86UF4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC190Q86UF4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC190Q86UF4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.84■□□□□ 0.45
CCDC190Q86UF4 AC133637.1-201ENST00000624115 1537 ntBASIC17.84■□□□□ 0.45
CCDC190Q86UF4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 AC010141.3-201ENST00000456659 717 ntBASIC17.84■□□□□ 0.45
CCDC190Q86UF4 AC087239.1-201ENST00000622671 572 ntBASIC17.84■□□□□ 0.45
CCDC190Q86UF4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC190Q86UF4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC190Q86UF4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC190Q86UF4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC190Q86UF4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC190Q86UF4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC190Q86UF4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC190Q86UF4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC190Q86UF4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC190Q86UF4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC190Q86UF4 AC011484.1-201ENST00000377652 1995 ntBASIC17.83■□□□□ 0.44
CCDC190Q86UF4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms