Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.66■□□□□ 0.58
NIPAL3Q6P499 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 AC061975.6-201ENST00000579045 1553 ntBASIC18.65■□□□□ 0.58
NIPAL3Q6P499 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPAL3Q6P499 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
NIPAL3Q6P499 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NIPAL3Q6P499 AC020907.5-201ENST00000624372 1936 ntBASIC18.64■□□□□ 0.58
NIPAL3Q6P499 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NIPAL3Q6P499 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NIPAL3Q6P499 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPAL3Q6P499 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 AL391422.3-201ENST00000603791 2761 ntBASIC18.63■□□□□ 0.57
NIPAL3Q6P499 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 POU5F1P4-201ENST00000413175 1085 ntBASIC18.63■□□□□ 0.57
NIPAL3Q6P499 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 AC120498.10-201ENST00000621827 505 ntBASIC18.63■□□□□ 0.57
NIPAL3Q6P499 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPAL3Q6P499 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPAL3Q6P499 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.61■□□□□ 0.57
NIPAL3Q6P499 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms