Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 AC104564.3-201ENST00000582367 638 ntBASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM53Q6P2H8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
TMEM53Q6P2H8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM53Q6P2H8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.64■□□□□ 0.58
TMEM53Q6P2H8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 AC123595.1-201ENST00000440769 1046 ntBASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 TPRG1LP1-201ENST00000598702 760 ntBASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 LINC02228-203ENST00000641970 1355 ntBASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM53Q6P2H8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 YBX1P1-201ENST00000445822 960 ntBASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
TMEM53Q6P2H8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 FZD10-202ENST00000539839 3282 ntBASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM53Q6P2H8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms