Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL356652.1-201ENST00000615962 565 ntBASIC26.12■■□□□ 1.77
RC3H1Q5TC82 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RC3H1Q5TC82 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.11■■□□□ 1.77
RC3H1Q5TC82 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.1■■□□□ 1.77
RC3H1Q5TC82 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 PPOX-219ENST00000544598 813 ntTSL 2 BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 AL353708.3-201ENST00000610272 989 ntBASIC26.09■■□□□ 1.77
RC3H1Q5TC82 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.09■■□□□ 1.77
RC3H1Q5TC82 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.08■■□□□ 1.77
RC3H1Q5TC82 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
RC3H1Q5TC82 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H1Q5TC82 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RC3H1Q5TC82 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.06■■□□□ 1.76
RC3H1Q5TC82 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC26.06■■□□□ 1.76
RC3H1Q5TC82 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
RC3H1Q5TC82 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26.06■■□□□ 1.76
RC3H1Q5TC82 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RC3H1Q5TC82 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.06■■□□□ 1.76
RC3H1Q5TC82 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RC3H1Q5TC82 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RC3H1Q5TC82 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms