Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AP002982.1-201ENST00000492365 877 ntBASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 CKBP1-201ENST00000565489 1086 ntBASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 AL671883.3-201ENST00000603274 991 ntBASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.47■■□□□ 1.35
COL13A1Q5TAT6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC23.46■■□□□ 1.35
COL13A1Q5TAT6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.46■■□□□ 1.35
COL13A1Q5TAT6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
COL13A1Q5TAT6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.46■■□□□ 1.35
COL13A1Q5TAT6 AC111152.3-201ENST00000569699 673 ntBASIC23.46■■□□□ 1.35
COL13A1Q5TAT6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.46■■□□□ 1.35
COL13A1Q5TAT6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.46■■□□□ 1.35
COL13A1Q5TAT6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.46■■□□□ 1.35
COL13A1Q5TAT6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.46■■□□□ 1.35
COL13A1Q5TAT6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL13A1Q5TAT6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
COL13A1Q5TAT6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.35
COL13A1Q5TAT6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL13A1Q5TAT6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL13A1Q5TAT6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.45■■□□□ 1.34
COL13A1Q5TAT6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL13A1Q5TAT6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL13A1Q5TAT6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
COL13A1Q5TAT6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.45■■□□□ 1.34
COL13A1Q5TAT6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.45■■□□□ 1.34
COL13A1Q5TAT6 UNC93B7-201ENST00000509439 705 ntBASIC23.45■■□□□ 1.34
COL13A1Q5TAT6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.45■■□□□ 1.34
COL13A1Q5TAT6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.45■■□□□ 1.34
COL13A1Q5TAT6 AC117500.6-201ENST00000624871 588 ntBASIC23.45■■□□□ 1.34
COL13A1Q5TAT6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 MESTP1-201ENST00000404287 994 ntBASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 CR392000.1-201ENST00000624770 1228 ntBASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL13A1Q5TAT6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 AL355385.1-201ENST00000606123 409 ntBASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 AL138966.2-201ENST00000621997 464 ntBASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 NBPF21P-201ENST00000425093 1451 ntBASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.43■■□□□ 1.34
COL13A1Q5TAT6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL13A1Q5TAT6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL13A1Q5TAT6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL13A1Q5TAT6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.42■■□□□ 1.34
COL13A1Q5TAT6 PRELID1P1-202ENST00000567272 903 ntBASIC23.42■■□□□ 1.34
COL13A1Q5TAT6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.42■■□□□ 1.34
COL13A1Q5TAT6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL13A1Q5TAT6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL13A1Q5TAT6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL13A1Q5TAT6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.42■■□□□ 1.34
COL13A1Q5TAT6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 AL390719.1-204ENST00000412397 1219 ntBASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms