Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRIF1Q5T3J3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.36■□□□□ 0.69
LRIF1Q5T3J3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRIF1Q5T3J3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRIF1Q5T3J3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
LRIF1Q5T3J3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRIF1Q5T3J3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRIF1Q5T3J3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 TCF3P1-201ENST00000423021 1937 ntBASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIF1Q5T3J3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 MIR2861-201ENST00000636310 90 ntBASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIF1Q5T3J3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
LRIF1Q5T3J3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
LRIF1Q5T3J3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRIF1Q5T3J3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.33■□□□□ 0.69
LRIF1Q5T3J3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LRIF1Q5T3J3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LRIF1Q5T3J3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRIF1Q5T3J3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRIF1Q5T3J3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.33■□□□□ 0.68
LRIF1Q5T3J3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRIF1Q5T3J3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRIF1Q5T3J3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.33■□□□□ 0.68
LRIF1Q5T3J3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
LRIF1Q5T3J3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 AC010141.2-201ENST00000452426 721 ntBASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRIF1Q5T3J3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 MIR6084-201ENST00000622012 110 ntBASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 AC116050.2-201ENST00000612102 1779 ntBASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRIF1Q5T3J3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms