Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCAPQ12770 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCAPQ12770 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCAPQ12770 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCAPQ12770 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SCAPQ12770 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCAPQ12770 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.22■□□□□ 0.99
SCAPQ12770 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCAPQ12770 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
SCAPQ12770 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.22■□□□□ 0.99
SCAPQ12770 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCAPQ12770 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCAPQ12770 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
SCAPQ12770 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.22■□□□□ 0.99
SCAPQ12770 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCAPQ12770 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.22■□□□□ 0.99
SCAPQ12770 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCAPQ12770 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.21■□□□□ 0.99
SCAPQ12770 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCAPQ12770 CYP21A1P-202ENST00000354927 1481 ntBASIC21.21■□□□□ 0.99
SCAPQ12770 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.21■□□□□ 0.99
SCAPQ12770 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCAPQ12770 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.21■□□□□ 0.99
SCAPQ12770 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCAPQ12770 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.21■□□□□ 0.99
SCAPQ12770 AC133552.2-202ENST00000575694 574 ntBASIC21.21■□□□□ 0.99
SCAPQ12770 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCAPQ12770 AL050303.2-201ENST00000619798 666 ntBASIC21.21■□□□□ 0.99
SCAPQ12770 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCAPQ12770 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.21■□□□□ 0.99
SCAPQ12770 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.21■□□□□ 0.99
SCAPQ12770 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCAPQ12770 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.21■□□□□ 0.99
SCAPQ12770 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
SCAPQ12770 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCAPQ12770 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.2■□□□□ 0.98
SCAPQ12770 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCAPQ12770 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.2■□□□□ 0.98
SCAPQ12770 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.2■□□□□ 0.98
SCAPQ12770 AC008694.1-202ENST00000636953 945 ntBASIC21.2■□□□□ 0.98
SCAPQ12770 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCAPQ12770 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCAPQ12770 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCAPQ12770 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCAPQ12770 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
SCAPQ12770 AC087633.2-202ENST00000565166 1439 ntBASIC21.2■□□□□ 0.98
SCAPQ12770 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.2■□□□□ 0.98
SCAPQ12770 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCAPQ12770 FP700111.2-201ENST00000619190 1892 ntBASIC21.2■□□□□ 0.98
SCAPQ12770 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.2■□□□□ 0.98
SCAPQ12770 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCAPQ12770 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SCAPQ12770 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCAPQ12770 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SCAPQ12770 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCAPQ12770 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
SCAPQ12770 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCAPQ12770 AL512625.2-201ENST00000417533 625 ntBASIC21.19■□□□□ 0.98
SCAPQ12770 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCAPQ12770 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SCAPQ12770 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.19■□□□□ 0.98
SCAPQ12770 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCAPQ12770 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCAPQ12770 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCAPQ12770 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCAPQ12770 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCAPQ12770 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.18■□□□□ 0.98
SCAPQ12770 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCAPQ12770 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.18■□□□□ 0.98
SCAPQ12770 FAM201B-201ENST00000458407 597 ntBASIC21.18■□□□□ 0.98
SCAPQ12770 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.18■□□□□ 0.98
SCAPQ12770 MIR4651-201ENST00000582622 73 ntBASIC21.18■□□□□ 0.98
SCAPQ12770 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.18■□□□□ 0.98
SCAPQ12770 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.18■□□□□ 0.98
SCAPQ12770 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCAPQ12770 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCAPQ12770 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SCAPQ12770 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCAPQ12770 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCAPQ12770 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SCAPQ12770 AL121603.2-201ENST00000557373 2117 ntBASIC21.17■□□□□ 0.98
SCAPQ12770 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.17■□□□□ 0.98
SCAPQ12770 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCAPQ12770 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCAPQ12770 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SCAPQ12770 MCRIP2P1-201ENST00000394346 511 ntBASIC21.17■□□□□ 0.98
SCAPQ12770 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.17■□□□□ 0.98
SCAPQ12770 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.17■□□□□ 0.98
SCAPQ12770 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.17■□□□□ 0.98
SCAPQ12770 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.17■□□□□ 0.98
SCAPQ12770 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.17■□□□□ 0.98
SCAPQ12770 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.17■□□□□ 0.98
SCAPQ12770 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.17■□□□□ 0.98
SCAPQ12770 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SCAPQ12770 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCAPQ12770 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SCAPQ12770 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCAPQ12770 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCAPQ12770 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCAPQ12770 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms