Protein–RNA interactions for Protein: Q12391

TY1A-NL1, Transposon Ty1-NL1 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-NL1Q12391 VPS55YJR044C 423 nt3.7□□□□□ -1.82
TY1A-NL1Q12391 YNL010WYNL010W 726 nt3.7□□□□□ -1.82
TY1A-NL1Q12391 HOS3YPL116W 2094 nt3.7□□□□□ -1.82
TY1A-NL1Q12391 GPI1YGR216C 1830 nt3.7□□□□□ -1.82
TY1A-NL1Q12391 RPB2YOR151C 3675 nt3.69□□□□□ -1.82
TY1A-NL1Q12391 TPS2YDR074W 2691 nt3.69□□□□□ -1.82
TY1A-NL1Q12391 SOK2YMR016C 2358 nt3.69□□□□□ -1.82
TY1A-NL1Q12391 JJJ2YJL162C 1752 nt3.69□□□□□ -1.82
TY1A-NL1Q12391 SLP1YOR154W 1764 nt3.69□□□□□ -1.82
TY1A-NL1Q12391 ATP15YPL271W 189 nt3.69□□□□□ -1.82
TY1A-NL1Q12391 RLF2YPR018W 1821 nt3.69□□□□□ -1.82
TY1A-NL1Q12391 PDS5YMR076C 3834 nt3.69□□□□□ -1.82
TY1A-NL1Q12391 MPS1YDL028C 2295 nt3.68□□□□□ -1.82
TY1A-NL1Q12391 GIP4YAL031C 2283 nt3.68□□□□□ -1.82
TY1A-NL1Q12391 CYB5YNL111C 363 nt3.68□□□□□ -1.82
TY1A-NL1Q12391 YBL109WYBL109W 336 nt3.68□□□□□ -1.82
TY1A-NL1Q12391 AIM9YER080W 1884 nt3.68□□□□□ -1.82
TY1A-NL1Q12391 ARG2YJL071W 1725 nt3.67□□□□□ -1.82
TY1A-NL1Q12391 NUP85YJR042W 2235 nt3.67□□□□□ -1.82
TY1A-NL1Q12391 HMG1YML075C 3165 nt3.67□□□□□ -1.82
TY1A-NL1Q12391 YCR075W-AYCR075W-A 228 nt3.67□□□□□ -1.82
TY1A-NL1Q12391 TSA2YDR453C 591 nt3.67□□□□□ -1.82
TY1A-NL1Q12391 OLI1Q0130 231 nt3.67□□□□□ -1.82
TY1A-NL1Q12391 YJL020W-AYJL020W-A 258 nt3.67□□□□□ -1.82
TY1A-NL1Q12391 ISU1YPL135W 498 nt3.67□□□□□ -1.82
TY1A-NL1Q12391 ACE2YLR131C 2313 nt3.67□□□□□ -1.82
TY1A-NL1Q12391 CWC22YGR278W 1734 nt3.67□□□□□ -1.82
TY1A-NL1Q12391 ASC1YMR116C 960 nt3.66□□□□□ -1.82
TY1A-NL1Q12391 YNL057WYNL057W 333 nt3.66□□□□□ -1.82
TY1A-NL1Q12391 RFC3YNL290W 1023 nt3.66□□□□□ -1.82
TY1A-NL1Q12391 YPL182CYPL182C 384 nt3.66□□□□□ -1.82
TY1A-NL1Q12391 DPH6YLR143W 2058 nt3.66□□□□□ -1.82
TY1A-NL1Q12391 LCB5YLR260W 2064 nt3.66□□□□□ -1.82
TY1A-NL1Q12391 SSY1YDR160W 2559 nt3.65□□□□□ -1.82
TY1A-NL1Q12391 MSS11YMR164C 2277 nt3.65□□□□□ -1.82
TY1A-NL1Q12391 YDR230WYDR230W 348 nt3.65□□□□□ -1.83
TY1A-NL1Q12391 LSM1YJL124C 519 nt3.65□□□□□ -1.83
TY1A-NL1Q12391 YLR053CYLR053C 327 nt3.65□□□□□ -1.83
TY1A-NL1Q12391 MLH2YLR035C 2088 nt3.64□□□□□ -1.83
TY1A-NL1Q12391 DIP2YLR129W 2832 nt3.64□□□□□ -1.83
TY1A-NL1Q12391 YKL156C-AYKL156C-A 117 nt3.64□□□□□ -1.83
TY1A-NL1Q12391 YMR105W-AYMR105W-A 195 nt3.64□□□□□ -1.83
TY1A-NL1Q12391 RPL32YBL092W 393 nt3.64□□□□□ -1.83
TY1A-NL1Q12391 YPL278CYPL278C 303 nt3.64□□□□□ -1.83
TY1A-NL1Q12391 RAD54YGL163C 2697 nt3.64□□□□□ -1.83
TY1A-NL1Q12391 AIM21YIR003W 2040 nt3.63□□□□□ -1.83
TY1A-NL1Q12391 tF(GAA)QtF(GAA)Q 75 nt3.63□□□□□ -1.83
TY1A-NL1Q12391 tR(ACG)JtR(ACG)J 73 nt3.63□□□□□ -1.83
TY1A-NL1Q12391 RPL23AYBL087C 414 nt3.63□□□□□ -1.83
TY1A-NL1Q12391 SNF2YOR290C 5112 nt3.63□□□□□ -1.83
TY1A-NL1Q12391 NRP1YDL167C 2160 nt3.63□□□□□ -1.83
TY1A-NL1Q12391 RED1YLR263W 2484 nt3.63□□□□□ -1.83
TY1A-NL1Q12391 LYP1YNL268W 1836 nt3.63□□□□□ -1.83
TY1A-NL1Q12391 MRP10YDL045W-A 288 nt3.62□□□□□ -1.83
TY1A-NL1Q12391 MTC3YGL226W 372 nt3.62□□□□□ -1.83
TY1A-NL1Q12391 RPS23AYGR118W 438 nt3.62□□□□□ -1.83
TY1A-NL1Q12391 YLR154W-EYLR154W-E 204 nt3.62□□□□□ -1.83
TY1A-NL1Q12391 FAA2YER015W 2235 nt3.62□□□□□ -1.83
TY1A-NL1Q12391 OSH2YDL019C 3852 nt3.61□□□□□ -1.83
TY1A-NL1Q12391 TCO89YPL180W 2400 nt3.61□□□□□ -1.83
TY1A-NL1Q12391 PDC2YDR081C 2778 nt3.61□□□□□ -1.83
TY1A-NL1Q12391 NUP133YKR082W 3474 nt3.61□□□□□ -1.83
TY1A-NL1Q12391 snR60snR60 104 nt3.61□□□□□ -1.83
TY1A-NL1Q12391 VTC1YER072W 390 nt3.61□□□□□ -1.83
TY1A-NL1Q12391 ECM15YBL001C 315 nt3.61□□□□□ -1.83
TY1A-NL1Q12391 HHF1YBR009C 312 nt3.61□□□□□ -1.83
TY1A-NL1Q12391 CDC45YLR103C 1953 nt3.61□□□□□ -1.83
TY1A-NL1Q12391 MTC4YBR255W 2085 nt3.61□□□□□ -1.83
TY1A-NL1Q12391 MNT3YIL014W 1893 nt3.6□□□□□ -1.83
TY1A-NL1Q12391 SPC105YGL093W 2754 nt3.6□□□□□ -1.83
TY1A-NL1Q12391 RPL34BYIL052C 366 nt3.6□□□□□ -1.83
TY1A-NL1Q12391 SPT10YJL127C 1923 nt3.6□□□□□ -1.83
TY1A-NL1Q12391 ROD1YOR018W 2514 nt3.6□□□□□ -1.83
TY1A-NL1Q12391 GRS2YPR081C 1857 nt3.59□□□□□ -1.83
TY1A-NL1Q12391 SPI1YER150W 447 nt3.59□□□□□ -1.83
TY1A-NL1Q12391 CCW14YLR390W-A 717 nt3.59□□□□□ -1.83
TY1A-NL1Q12391 MSK1YNL073W 1731 nt3.58□□□□□ -1.84
TY1A-NL1Q12391 TAF7YMR227C 1773 nt3.58□□□□□ -1.84
TY1A-NL1Q12391 TRZ1YKR079C 2517 nt3.58□□□□□ -1.84
TY1A-NL1Q12391 TIM13YGR181W 318 nt3.58□□□□□ -1.84
TY1A-NL1Q12391 NCE101YJL205C 162 nt3.58□□□□□ -1.84
TY1A-NL1Q12391 SRL3YKR091W 741 nt3.58□□□□□ -1.84
TY1A-NL1Q12391 OM14YBR230C 405 nt3.58□□□□□ -1.84
TY1A-NL1Q12391 SEA4YBL104C 3117 nt3.57□□□□□ -1.84
TY1A-NL1Q12391 SWH1YAR042W 3567 nt3.57□□□□□ -1.84
TY1A-NL1Q12391 YDL041WYDL041W 354 nt3.57□□□□□ -1.84
TY1A-NL1Q12391 HPA3YEL066W 540 nt3.57□□□□□ -1.84
TY1A-NL1Q12391 RPS18BYML026C 441 nt3.57□□□□□ -1.84
TY1A-NL1Q12391 RPO31YOR116C 4383 nt3.57□□□□□ -1.84
TY1A-NL1Q12391 ARK1YNL020C 1917 nt3.56□□□□□ -1.84
TY1A-NL1Q12391 LRE1YCL051W 1752 nt3.56□□□□□ -1.84
TY1A-NL1Q12391 PHO2YDL106C 1680 nt3.56□□□□□ -1.84
TY1A-NL1Q12391 ZDS1YMR273C 2748 nt3.56□□□□□ -1.84
TY1A-NL1Q12391 YHL041WYHL041W 450 nt3.56□□□□□ -1.84
TY1A-NL1Q12391 YPR063CYPR063C 423 nt3.56□□□□□ -1.84
TY1A-NL1Q12391 SAF1YBR280C 1914 nt3.56□□□□□ -1.84
TY1A-NL1Q12391 MUS81YDR386W 1899 nt3.56□□□□□ -1.84
TY1A-NL1Q12391 ATP25YMR098C 1839 nt3.56□□□□□ -1.84
TY1A-NL1Q12391 YDR246W-AYDR246W-A 201 nt3.55□□□□□ -1.84
TY1A-NL1Q12391 AIM11YER093C-A 414 nt3.55□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 122.4 ms