Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB38P57729 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB38P57729 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB38P57729 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RAB38P57729 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RAB38P57729 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RAB38P57729 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB38P57729 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB38P57729 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 PGM5P4-201ENST00000421970 445 ntBASIC19.31■□□□□ 0.68
RAB38P57729 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB38P57729 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB38P57729 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 MIR2861-201ENST00000636310 90 ntBASIC19.31■□□□□ 0.68
RAB38P57729 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RAB38P57729 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB38P57729 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 AC087633.2-202ENST00000565166 1439 ntBASIC19.31■□□□□ 0.68
RAB38P57729 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB38P57729 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB38P57729 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB38P57729 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAB38P57729 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.3■□□□□ 0.68
RAB38P57729 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAB38P57729 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB38P57729 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB38P57729 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB38P57729 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB38P57729 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB38P57729 CYP2T3P-201ENST00000601990 817 ntBASIC19.3■□□□□ 0.68
RAB38P57729 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
RAB38P57729 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB38P57729 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
RAB38P57729 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB38P57729 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB38P57729 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB38P57729 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB38P57729 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB38P57729 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB38P57729 SLC29A4P1-201ENST00000398760 971 ntBASIC19.29■□□□□ 0.68
RAB38P57729 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.29■□□□□ 0.68
RAB38P57729 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.29■□□□□ 0.68
RAB38P57729 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RAB38P57729 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB38P57729 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.29■□□□□ 0.68
RAB38P57729 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB38P57729 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.29■□□□□ 0.68
RAB38P57729 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RAB38P57729 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB38P57729 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB38P57729 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB38P57729 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB38P57729 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB38P57729 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB38P57729 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB38P57729 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RAB38P57729 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB38P57729 AL355472.2-201ENST00000422958 438 ntBASIC19.28■□□□□ 0.68
RAB38P57729 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB38P57729 GUSBP6-202ENST00000438529 1198 ntBASIC19.28■□□□□ 0.68
RAB38P57729 TSPY6P-201ENST00000448518 926 ntBASIC19.28■□□□□ 0.68
RAB38P57729 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB38P57729 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RAB38P57729 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB38P57729 AL109923.1-201ENST00000618799 583 ntBASIC19.28■□□□□ 0.68
RAB38P57729 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB38P57729 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB38P57729 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB38P57729 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB38P57729 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB38P57729 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB38P57729 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB38P57729 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB38P57729 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB38P57729 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms