Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
WNT3AP56704 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
WNT3AP56704 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.74■□□□□ 0.91
WNT3AP56704 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.74■□□□□ 0.91
WNT3AP56704 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
WNT3AP56704 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.74■□□□□ 0.91
WNT3AP56704 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
WNT3AP56704 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.73■□□□□ 0.91
WNT3AP56704 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3AP56704 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
WNT3AP56704 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.73■□□□□ 0.91
WNT3AP56704 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
WNT3AP56704 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3AP56704 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.73■□□□□ 0.91
WNT3AP56704 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.73■□□□□ 0.91
WNT3AP56704 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
WNT3AP56704 AL121603.2-201ENST00000557373 2117 ntBASIC20.73■□□□□ 0.91
WNT3AP56704 AC016405.3-201ENST00000607710 860 ntBASIC20.73■□□□□ 0.91
WNT3AP56704 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
WNT3AP56704 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3AP56704 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
WNT3AP56704 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
WNT3AP56704 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
WNT3AP56704 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3AP56704 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3AP56704 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3AP56704 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3AP56704 AC073314.1-201ENST00000568729 2216 ntBASIC20.72■□□□□ 0.91
WNT3AP56704 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.72■□□□□ 0.91
WNT3AP56704 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3AP56704 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3AP56704 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3AP56704 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3AP56704 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3AP56704 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.72■□□□□ 0.91
WNT3AP56704 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.72■□□□□ 0.91
WNT3AP56704 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.72■□□□□ 0.91
WNT3AP56704 AL162412.1-201ENST00000567129 965 ntBASIC20.72■□□□□ 0.91
WNT3AP56704 FAM21FP-204ENST00000608637 956 ntBASIC20.72■□□□□ 0.91
WNT3AP56704 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.72■□□□□ 0.91
WNT3AP56704 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
WNT3AP56704 MIR2861-201ENST00000636310 90 ntBASIC20.72■□□□□ 0.91
WNT3AP56704 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.72■□□□□ 0.91
WNT3AP56704 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3AP56704 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
WNT3AP56704 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.72■□□□□ 0.91
WNT3AP56704 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
WNT3AP56704 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
WNT3AP56704 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.71■□□□□ 0.91
WNT3AP56704 AC068338.2-201ENST00000563278 1430 ntBASIC20.71■□□□□ 0.91
WNT3AP56704 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.71■□□□□ 0.91
WNT3AP56704 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
WNT3AP56704 AC004911.1-201ENST00000416316 871 ntBASIC20.71■□□□□ 0.91
WNT3AP56704 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.71■□□□□ 0.91
WNT3AP56704 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.71■□□□□ 0.91
WNT3AP56704 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.71■□□□□ 0.91
WNT3AP56704 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.71■□□□□ 0.91
WNT3AP56704 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.71■□□□□ 0.91
WNT3AP56704 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.71■□□□□ 0.91
WNT3AP56704 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
WNT3AP56704 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
WNT3AP56704 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.71■□□□□ 0.91
WNT3AP56704 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
WNT3AP56704 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
WNT3AP56704 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.7■□□□□ 0.9
WNT3AP56704 LINC01006-201ENST00000333319 2292 ntBASIC20.7■□□□□ 0.9
WNT3AP56704 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
WNT3AP56704 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
WNT3AP56704 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
WNT3AP56704 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
WNT3AP56704 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
WNT3AP56704 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.7■□□□□ 0.9
WNT3AP56704 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.7■□□□□ 0.9
WNT3AP56704 AC231657.2-201ENST00000624556 255 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms