Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
CRISP3P54108 DUX4L6-201ENST00000626483 1275 ntBASIC19.18■□□□□ 0.66
CRISP3P54108 DUX4L1-201ENST00000627662 1275 ntBASIC19.18■□□□□ 0.66
CRISP3P54108 DUX4L8-201ENST00000629013 1275 ntBASIC19.18■□□□□ 0.66
CRISP3P54108 DUX4L3-201ENST00000630187 1275 ntBASIC19.18■□□□□ 0.66
CRISP3P54108 DUX4L7-201ENST00000630678 1275 ntBASIC19.18■□□□□ 0.66
CRISP3P54108 DUX4L5-201ENST00000630834 1275 ntBASIC19.18■□□□□ 0.66
CRISP3P54108 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CRISP3P54108 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CRISP3P54108 AC027702.1-201ENST00000563810 1770 ntBASIC19.18■□□□□ 0.66
CRISP3P54108 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRISP3P54108 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.17■□□□□ 0.66
CRISP3P54108 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.17■□□□□ 0.66
CRISP3P54108 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CRISP3P54108 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRISP3P54108 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRISP3P54108 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.17■□□□□ 0.66
CRISP3P54108 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CRISP3P54108 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.17■□□□□ 0.66
CRISP3P54108 RARRES2P11-201ENST00000635158 484 ntBASIC19.17■□□□□ 0.66
CRISP3P54108 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CRISP3P54108 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRISP3P54108 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRISP3P54108 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRISP3P54108 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CRISP3P54108 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CRISP3P54108 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRISP3P54108 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CRISP3P54108 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CRISP3P54108 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CRISP3P54108 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.16■□□□□ 0.66
CRISP3P54108 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.16■□□□□ 0.66
CRISP3P54108 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CRISP3P54108 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRISP3P54108 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CRISP3P54108 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.16■□□□□ 0.66
CRISP3P54108 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRISP3P54108 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRISP3P54108 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRISP3P54108 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CRISP3P54108 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRISP3P54108 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CRISP3P54108 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CRISP3P54108 AC020907.5-201ENST00000624372 1936 ntBASIC19.15■□□□□ 0.66
CRISP3P54108 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRISP3P54108 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CRISP3P54108 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRISP3P54108 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRISP3P54108 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRISP3P54108 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CRISP3P54108 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.15■□□□□ 0.66
CRISP3P54108 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRISP3P54108 YBX1P1-201ENST00000445822 960 ntBASIC19.15■□□□□ 0.66
CRISP3P54108 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CRISP3P54108 AC104187.1-201ENST00000607510 612 ntBASIC19.15■□□□□ 0.66
CRISP3P54108 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.15■□□□□ 0.66
CRISP3P54108 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.15■□□□□ 0.66
CRISP3P54108 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRISP3P54108 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CRISP3P54108 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.15■□□□□ 0.66
CRISP3P54108 PCDHAC2-203ENST00000615316 3011 ntBASIC19.15■□□□□ 0.66
CRISP3P54108 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRISP3P54108 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
CRISP3P54108 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CRISP3P54108 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
CRISP3P54108 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CRISP3P54108 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CRISP3P54108 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.14■□□□□ 0.65
CRISP3P54108 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.14■□□□□ 0.65
CRISP3P54108 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CRISP3P54108 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.14■□□□□ 0.65
CRISP3P54108 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.14■□□□□ 0.65
CRISP3P54108 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.14■□□□□ 0.65
CRISP3P54108 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.14■□□□□ 0.65
CRISP3P54108 TERF1P2-201ENST00000583350 1212 ntBASIC19.14■□□□□ 0.65
CRISP3P54108 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.14■□□□□ 0.65
CRISP3P54108 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CRISP3P54108 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.14■□□□□ 0.65
CRISP3P54108 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CRISP3P54108 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRISP3P54108 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CRISP3P54108 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRISP3P54108 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRISP3P54108 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRISP3P54108 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.13■□□□□ 0.65
CRISP3P54108 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRISP3P54108 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms